Glycine max (soybean): 100793279
Help
Entry
100793279 CDS
T01710
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
gmx
Glycine max (soybean)
Pathway
gmx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100793279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmx04131
]
100793279
Membrane trafficking [BR:
gmx04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100793279
Hops complex
100793279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
Clathrin
TPR_Vps41
zf-C3H2C3
Beta-prop_EML
zf-C3HC4_2
zf-RING_2
zf-RING_5
TPR_ELP1
zf_RING_Vps8_fungal
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
100793279
NCBI-ProteinID:
XP_003529013
UniProt:
I1KJF2
LinkDB
All DBs
Position
7:13548544..13554690
Genome browser
AA seq
966 aa
AA seq
DB search
MYQWRKFEFFEEKYGAKCAVPEADEDDSGVIAAERKIECCSSGRGKVVTGFDDGVVCFFD
RGLKFNYAFQPHSSSVLFLQQLKQRNFLVTIGEDEQLTPQQTALCLKVFDLDKMQSESSS
TTSPDCVGILRIFTNQFPEAKITSFLVLEEVPPILLIAIGLDSGSIYCIKGDIARERITR
FKLQVENNHSDKTLSAVTGLGFRVDGQSLQLFVVTPSSVSLFSLHDQPPRRQTLDQIGSG
VNSVAMSDRSELIIGRPEAVYFYEVDGRGPCWAFEGEKKLLGWFRGYLLCVIADQRTGKH
TFNIYDLKNRLIAHSALVKEVSHMLYEWGNIILIMNDKSALCIGEKDMESKLDMLFKKNL
YTVAINLVQTQQADAAATAEVLRKYGDHLYSKQDYDEAMAQYIHTIGHLEPSYVIQKFLD
AQRIYNLTNYLEKLHEKGLASKDHTTLLLNCYTKLKDVEKLNLFIKSDDSIGELKFDVET
AIRVCRAANYHEHAMYVAKKAGRHEWYLKILLEDLGSYEEALEYISSLESSQAGMTIKEY
GKILIEHKPVETIQILIRLCTEDGDKRGRSNGVYMSMLPSPVDFLSIFIHHPQSLMDFLE
KYTNKVKDSPAQVEIHNTLLELYISNELNFPSMSQVNDGGNYLNGASAKTMILSAQSNGN
IGDHKSSEQEKNHLERLEKGLRLLKTAWPPETEHPQYDVDLAIILCEMNAFKDGLLYLYE
KMKLYKEVIACYMQAHDHEGLIACCKRLGDSVKGGDSSLWADVLKYFGELGEDCSKEVKE
VLTYIERDDILPPMIVLQTLSRNPCLTLSVLKDYIARKLERESKMIEEDRQAIEKYQEDT
LAMRKEIQDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHLRCLGDNEKECPQCAPE
YRSVLEMKKNLEQNSKDQDRFFQQVKSSKDGFSVIAEYFGKGIISKISNGSTSGPVSGTA
SSSSGF
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagtggaggaagttcgagttcttcgaggagaagtacggcgcgaagtgcgcggtt
cctgaggccgacgaagacgacagcggcgtcatcgcagcggagaggaagatcgagtgctgt
tcgagcggtaggggcaaagtcgtcaccggcttcgacgacggcgtcgtttgcttcttcgat
cgaggcctcaagtttaactacgctttccagcctcactcctcttccgttctctttcttcag
caactcaagcaacgcaactttctggtaacaattggggaggatgaacagcttactccccag
caaacagctttgtgcctcaaggtttttgaccttgacaagatgcaatcggagagttcgagc
acgacaagtcctgattgcgttgggatattgcgaatattcactaatcagtttcctgaggca
aagattacatcatttttggttttagaagaagtgccacctatactactcatagctattggc
ttggacagtggttctatttactgcatcaaaggagacattgcacgggagcgtatcactcgt
ttcaagcttcaggtggaaaacaaccattcggacaaaactctttctgctgtaactggactt
gggtttagggtggatggtcaatctctacagttatttgttgtgactccaagttcagtgagc
ttgttttcgttgcatgatcaaccgccaagaaggcagacccttgatcagattggatctggt
gtgaacagtgttgcaatgagtgatcgatctgagttgataattggtcgaccagaggcagta
tatttttatgaagttgatgggcgtggtccttgttgggcttttgagggagagaagaaattg
cttggatggtttcgtggataccttttgtgtgttattgcagatcaaagaacaggaaagcat
actttcaacatctatgacctgaagaatcgattaatagctcacagtgcattggttaaagaa
gtttctcatatgctctatgaatggggtaacatcatactcataatgaatgacaaatcagct
ttatgtattggagaaaaggatatggaaagcaagctagacatgttattcaagaaaaaccta
tatactgtagcaattaatcttgtacagactcagcaagcagatgcagcagctactgctgaa
gtgttaaggaaatatggggatcatctatatagcaagcaagactatgatgaagcaatggcc
cagtacatacatactattggtcaccttgaaccttcttatgttatacagaagtttttggat
gctcaaaggatctacaacctcacaaattacttagagaagctacatgagaagggtcttgct
tctaaagatcacaccacacttctattaaactgttacactaaattgaaagatgttgaaaag
ttaaatctatttattaaaagcgatgacagcattggggaacttaaatttgatgtggaaaca
gcaatcagggtttgccgtgctgccaattaccatgagcatgcaatgtatgttgcaaagaaa
gcagggaggcatgaatggtacttgaagatcttgcttgaagatcttggtagctatgaagaa
gccttggaatatatttcaagccttgaatcaagtcaggcagggatgacaataaaggagtat
gggaagattctgatagagcacaagccagtggagacaattcagattctcataaggctttgc
acagaagatggtgacaaaagaggacgctcaaatggagtgtacatgtctatgttgccatct
cctgttgattttcttagcatcttcattcatcatcctcagtcccttatggattttcttgaa
aaatataccaataaggtcaaggactcacctgctcaagttgagattcacaataccctctta
gagttgtatatatccaatgaattgaactttccttcaatgtcacaagttaatgatggtgga
aattaccttaatggagcatcagcaaaaaccatgattttaagtgctcaatctaatggaaac
attggtgatcacaaaagttcagagcaggaaaagaaccatctcgaaagacttgaaaagggt
ttacgcttgcttaagactgcatggcctccagagacagaacatccacaatatgatgttgat
ttagctattatactatgtgaaatgaatgcattcaaagatgggcttttgtatttgtatgag
aagatgaaactctataaagaagtgattgcttgctatatgcaggcacacgatcatgagggg
ctaattgcatgctgcaagaggctgggggattctgttaaaggaggggactcatctctttgg
gcagatgtacttaaatattttggtgagcttggagaagattgttctaaagaagtaaaagaa
gttctgacttatattgagagggatgatattttgccccctatgattgtgcttcaaactctt
tcccgaaatccatgcctcacgctttctgtgctcaaagattacattgctcgaaagcttgag
cgggaatcaaagatgattgaggaggaccgacaagctattgagaaatatcaggaagataca
ctggcaatgagaaaagagattcaagatcttaggacaaatgctcgaatttttcagcttagc
aagtgcactgcatgcaccttcacccttgatttgcctgccgtgcacttcatgtgcatgcac
tcattccacctgcgctgccttggtgataatgaaaaagaatgccctcagtgtgcacctgaa
tataggtctgtcttagaaatgaaaaaaaatttagagcaaaattctaaggatcaggacaga
ttttttcagcaggtgaagagctctaaagatgggttttctgtcattgctgaatattttgga
aaagggatcatcagcaaaataagtaatggatccacttctggtcccgtatccggaactgca
tcatccagtagtggtttctaa
DBGET
integrated database retrieval system
