Glycine max (soybean): 100793506
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Entry
100793506 CDS
T01710
Name
(RefSeq) protein DAMAGED DNA-BINDING 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
gmx
Glycine max (soybean)
Pathway
gmx03420
Nucleotide excision repair
gmx04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100793506
09124 Replication and repair
03420 Nucleotide excision repair
100793506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmx04121
]
100793506
03400 DNA repair and recombination proteins [BR:
gmx03400
]
100793506
Ubiquitin system [BR:
gmx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100793506
DNA repair and recombination proteins [BR:
gmx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
100793506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EIPR1
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
WD40_RFWD3
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
100793506
NCBI-ProteinID:
XP_003519249
UniProt:
A0A368UIJ6
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Position
2:43148291..43153404
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AA seq
556 aa
AA seq
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MAPVTPRTAFPKVLIERDSDSEQSSSEEEEEKLDEEEEEEEVGVSTANEKTEKLELGSDA
NRKGKAPITISLKKVCKVCKKPGHEAGFKGAAYIDCPMKPCFLCKMPGHTTLTCPHRVST
EHGVVPAPRRKACKPLEYVFERQLRPSLPSIKPKYVIPDQVNCAVIRYHSRRITCLEFHP
TKNNILLSGDKKGQLGVWDFGKVYEKVVYGNIHSCLVNNMRFNPTNDCMVYSASSDGTIS
CTDLETGISSSPLNLNPDGWQGPNTWKMLNGLDINSEKGLVLVADSFGFLHMVDIRSNNR
SGDAILIHKKGKVVGIHCNPIQPDIFLTCGNDHFARIWDLRQIEAGSSLYDLKHTRVVNS
AYFSPISGTKILTTSQDNRLRVWDSIFGNVDSPSREIVHSHDFNRHLTPFKAEWDPKDPS
ESLAVVGRYISENYNGAALHPIDFIDTSTGQLVAEVMDPNITTISPVNKLHPRDDILATG
SSRSLFIWKPKEKSELVEEKDEQKIVVCGKAEKKRGKKNGNISDESDDEGFMSKSKKSKS
KKTEWKLSRCTTKDNR
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcaccggttactccaagaaccgcgttccccaaggttctcatcgagagagactctgac
tccgaacagagttcatccgaagaagaagaagaaaaacttgacgaagaagaagaagaagaa
gaagttggggtttctactgcaaatgagaagaccgagaaactggaactgggttccgacgca
aacagaaaaggaaaagcccccatcactattagtctaaaaaaagtttgcaaggtgtgtaag
aagcctggtcatgaagcgggctttaagggtgccgcgtatattgattgccccatgaagcct
tgttttttgtgtaaaatgcctgggcataccactttgacttgcccgcatcgtgtctctact
gagcatggagttgttccagcacctcgcaggaaagcgtgtaaacctttggaatatgtgttt
gaacgccagctacgaccatccctaccttcaatcaagcccaaatatgtgatcccagaccaa
gtgaattgtgctgtcatcagatatcacagcagacggataacatgcttggagttccacccc
acaaagaataacatcctgttatctggagataagaaagggcaacttggagtatgggatttt
ggtaaagtatacgagaaggtagtctatgggaacatacattcttgtttagtgaacaatatg
aggtttaatcctacaaatgattgtatggtctattctgcatcctcagatggaaccattagt
tgtactgacttggagacaggaatatcatcttctccattgaacctgaatcctgatggatgg
cagggtccaaacacttggaaaatgctcaatggcttggatattaattctgagaaaggtctc
gttcttgttgctgatagctttggttttcttcacatggttgacattcgctccaacaacagg
agtggtgatgcaattttgatccacaaaaaaggaaaagttgttggtatccattgcaatcca
attcaaccagacatctttctgacttgtggaaatgatcattttgctcgtatttgggacctg
cgtcaaatagaagctggatcatccctttatgacctcaagcatacacgtgttgttaactct
gcatatttctctccaatatccggaaccaaaattctcactacatcgcaggacaaccgtctt
cgtgtatgggattctatctttggtaatgtggactctcccagccgagaaattgtacatagt
catgatttcaatcggcatttgacaccctttaaagctgaatgggatccaaaggatccatca
gagtcccttgctgttgttggtcgttatataagtgaaaattacaatggagctgccctccat
cccattgattttatagatacaagtacagggcaactggtagccgaagtgatggacccaaac
atcacaaccatcagtcctgtgaataagctgcatccccgtgatgatatcctggcaactggg
agttctagatctctgttcatttggaagcccaaggagaagtcagagcttgttgaggagaag
gatgaacagaaaattgtggtttgtggaaaagctgagaagaaacgtggaaagaaaaatggc
aatattagcgatgaatctgatgatgaaggattcatgtccaagtccaagaagtctaagtct
aaaaagacagagtggaaattgtctcgctgcactactaaggataatcgctga
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