Glycine max (soybean): 100793812
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Entry
100793812 CDS
T01710
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
gmx
Glycine max (soybean)
Pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100793812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
100793812
Spliceosome [BR:
gmx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
100793812
Complex C
U4/U6.U5 tri-SnRNP related factors
100793812
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Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
100793812
NCBI-ProteinID:
XP_003544972
UniProt:
I1MBS7
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Position
14:complement(48503387..48509705)
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AA seq
444 aa
AA seq
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MEIQTCGRPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYCADPKTLWNWFESYVK
DDEEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSTHSG
STGETTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPIRRTLPSHEKNGSDDIR
RSPSNRRSQSREYPDRERDRDRDRSQSRDRDRERDRDRDRERDRDRYRDRDRNREWERDR
DRDRERYRDHDSERDQDRDRIRRNNERERERERIYDYDKRSKYTERESSRDYDNGSRHYR
RSRSRSRSRSRSRSLQAGTGWYESRSSPQREESKRTSASSNLAKLKDMYGDLGDSKGDAN
MERIPRKDSGGEEVIRLGGSTWKD
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggagatacagacttgtggcaggccgattgactccttgctagagaaagtgctttgtatg
aatattctgtcgtctgattacttcaaggagctctatcgattgaaaacgtatcacgaagtt
attgatgagatctacaatcaagttgatcacgtggagccatggatgactgggaattgtcgc
ggtccttcaactgcattttgtcttctgtacaagttttttactatgaagctcaccgtcaag
caaatgcacgggctgttaaagcaccccgattctccttacataagagcggttggatttctc
tatctgagatattgtgctgatccgaagacactatggaattggtttgagtcatatgtaaaa
gatgatgaggaattttctcccggatctaatggtcgaatgactacaatgggtgtatatgtc
cgtgatttgcttcttggacagtattatttcgacacactgtttcctcgcatccctgttcct
gtattgcggcaggttgtgtctaatcttgaaaagttgaagctcccctctacacattctggt
tcaacaggggaaactactcgtcatggttctgatgatactgcccgtagaccaccttctgtt
aaagctgccctttcagtctcttttggtcagcgggctccacaccgggcttccacaagagat
tcttcacctattcgccgtacattaccttctcatgaaaaaaatggcagtgatgacataaga
agatctccaagtaatcgccgcagccagagccgtgaatatcctgatagggagagggatagg
gaccgagaccggtcacagtccagagacagggatcgggaacgtgatagagacagggatcgg
gaacgtgatagggacagataccgtgaccgagataggaacagggagtgggagcgagatcga
gatcgagaccgggaaagatacagggatcatgactcggaaagagatcaggatagggacaga
atcaggaggaataatgagcgggaaagagagagagagaggatttacgattatgacaagagg
tctaagtacacagagagagaaagcagccgggattatgacaatggtagtaggcactatcgt
aggagcaggagtcggagcaggagcaggagtagaagtcggagcttgcaagctggcactggt
tggtatgaatcacgatctagtcctcagagagaggagagtaagagaacttctgcttcgagt
aatcttgctaaacttaaagatatgtatggtgatttaggggatagtaaaggagatgccaac
atggaaagaattcctagaaaggatagtggaggtgaagaggttattagacttggcgggtct
acttggaaggattag
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