Glycine max (soybean): 100793891
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Entry
100793891 CDS
T01710
Name
(RefSeq) DNA mismatch repair protein PMS1 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
gmx
Glycine max (soybean)
Pathway
gmx03430
Mismatch repair
gmx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100793891
03460 Fanconi anemia pathway
100793891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmx03400
]
100793891
DNA repair and recombination proteins [BR:
gmx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
100793891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Herpes_UL49_1
Motif
Other DBs
NCBI-GeneID:
100793891
NCBI-ProteinID:
XP_003536886
UniProt:
K7LGX1
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Position
10:complement(1648106..1655163)
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AA seq
944 aa
AA seq
DB search
MVVEAQIIKPIGKGIVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDFGEQWFQ
VIDNGCGISPNNFKVLALKHHTSKLAEFHDLQSLTTFGFRGEALSSLCALGNLTVETRTA
SEPVATHLTFDSSGVLVAERKTARQIGTTVMVKKLFSSLPVRSKEFSRNIRREYGKLVSL
LNAYALIAKGVRFVCTNTTGKNVRSVVLKTQGSGSLKDNIITVLGMNTFSCLEPVTLSIS
DSCKVEGFLSKSGQGNGRNLVDRQYFFVNGRPVDMPKVSKVVNELYRGANSKQYPIVILN
FTVPTRTYDVNVTPDKRKIFFSEENALLQALREGLQQIYSASNVCYSVNEVVLPAEKEAC
VELCSSHGKSPIVMKLLSPNGSRPQKEQCSESNNGSISLDEINAECNNDTISQDEHEEKH
ITHSKNASESINEYLYSDVDEGLIRENDGNLMNQEFTLRAHCASKDDNSGRQSASPSSII
PDQTTLVSRTVESGSSSSKYSFNHSRHVQSTLNNFVSVNKRNRDSVIRALSEVPVLRNPH
CQLKTANTETHDLITRSSLCFDQCDELARASEIEALKQLNPDNVFHKNENSVSFKGDSSD
REPKSNMELDLKNNTPIGDTASINPSSIDMITADVFASDPPLHSSSVRLDSSKSSRKKIC
SNMQFSFQELKKRREKRLSLLQSSKFGCGKAKVKSCYSDATLELSRSEIAEQKERALAAA
ATELERFFKKEDFSRMKVIGQFNLGFIICKLDQDLFIVDQHAADEKYNFERLSQSTILNQ
QPLLRPIKLELSPEEEIVASMHMDIIRKNGFTLEEDPNAPPGCRFKLKSVPFSKNTMFGI
EDVKELISILSDGDGHVECSIVGSYKLDTSDSVCPSRVRAMLASRACRSSIMVGDALGRN
EMQKILEHMAELKSPWNCPHGRPTMRHLVDLTKIHTSSELTMPI
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggtagttgaagctcaaataatcaagcccatcggcaagggcatcgttcacagaatctgc
gccggtcaagtcatcctcgacctctcctccgccgtcaaggaacttgtcgaaaacagtttg
gacgccggcgccaccagcatcgaaatctccctcaaagacttcggcgaacagtggtttcaa
gtcatcgacaacggttgcggcatttccccaaacaatttcaaggttcttgcgctgaagcat
cacacgtcaaagttagcggaatttcacgatcttcagtctctgacgacttttggattccga
ggggaggcgctgagttcgctctgcgcgttggggaacttgacagttgaaaccagaacggcg
agcgaaccggtcgctacgcacttgacttttgacagttccggtgtccttgtggcggaaaga
aaaacggcacggcaaattggtaccactgttatggttaagaagttgttctccagtttgcct
gtgagaagcaaagagtttagtcgtaacatacgtagggaatatggcaagttggtttctctg
ttgaatgcttatgcccttatagcgaaaggagtccgttttgtctgcaccaacacgactggt
aaaaatgtgaggtctgtggttcttaaaacgcaaggaagtggttctcttaaggataacatc
ataacagtgcttggcatgaacactttcagctgcttagagcccgtgacattgtctatatct
gattcttgcaaggttgaaggatttctttctaagtctggacagggcaatggacgcaatttg
gtggatagacagtatttttttgtgaatggtagaccggtggatatgcctaaagttagcaaa
gttgtgaatgagttgtacaggggtgcaaattccaaacagtatcccattgttattttgaat
tttacggttcctacaagaacgtatgatgtcaatgtgactcctgacaagaggaaaatattt
ttttctgaagaaaatgccctattgcaagccctgagagagggattgcaacaaatttattct
gctagtaacgtctgttactctgttaatgaagttgtgttgcctgctgaaaaagaagcatgt
gttgagttgtgttcctctcatgggaagtctcctattgtaatgaaactattgtccccaaat
ggcagtcgtcctcagaaagagcaatgtagtgaaagtaacaatggcagtatttctttagat
gaaattaatgctgagtgcaacaatgatactatttctcaggatgagcatgaggagaaacat
attactcattccaaaaatgcttctgaatcgattaatgaatatctgtactcagatgttgat
gaagggctaattcgtgagaatgatgggaatttaatgaaccaggagttcacactcagagcg
cattgcgcttcaaaggatgacaatagtggaagacagtcagcgagtcctagtagtattata
cctgatcaaactacccttgtctcaaggacagttgagagtggcagctcttctagtaaatat
tcatttaaccattcaagacatgttcagtccactcttaacaactttgtttctgtaaataaa
agaaatcgggatagtgtcattagagccttatctgaagtgcctgttcttagaaatcctcat
tgtcaattgaagactgcaaatactgaaacacatgacttgattacaagatcatcactttgt
tttgaccaatgtgatgaacttgctagggcgagcgagattgaagctttgaagcaacttaat
cctgataatgtcttccacaaaaatgaaaattcagtttcttttaagggtgactcctctgat
agagaacctaaatctaatatggaattagatctaaagaataatacacctataggggataca
gcatctattaatccttctagcattgatatgatcactgcggatgtttttgcctcagaccct
ccattacattcatcatctgtacggttagattcttccaagtcttccaggaagaagatatgc
tccaacatgcaattttcttttcaagagcttaagaaaagaagagagaagaggctttctctg
ttgcaatccagtaaatttggatgtggaaaagctaaagtcaaaagttgctattcggatgca
actttggagctttcacgatcagaaattgcagagcagaaagaaagggccttggcagcagca
gctaccgaacttgaaagatttttcaagaaggaagacttcagcagaatgaaggtgattggg
caattcaatcttggatttatcatttgtaaattggatcaagatttattcattgtggatcag
catgctgctgatgagaagtataattttgagcgtctatcacagtcaaccatcttgaaccaa
caacctcttcttaggccaataaaattggagttatcccccgaagaagaaatagttgcttca
atgcacatggacattatcaggaagaatggatttaccttggaagaggatccaaatgcaccg
cctggatgccgttttaaattaaagtctgtccccttcagtaaaaacactatgtttggaatt
gaagatgttaaggagctgatctctatcctgtctgatggtgatggtcatgtggaatgttcc
atagttggtagctataaactggacacctcagattctgtttgcccttcaagagttcgtgca
atgttggcatcacgtgcatgtcgatcatcaattatggttggtgatgcacttggaagaaat
gaaatgcagaagatacttgagcatatggctgagctgaaatccccatggaattgcccccat
ggcagaccaaccatgcgccatttagttgacttgacaaaaattcacacgagctctgaactt
acaatgccgatctaa
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