Glycine max (soybean): 100793917
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Entry
100793917 CDS
T01710
Name
(RefSeq) protein ALTERED SEED GERMINATION 2
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmx04121
]
100793917
Ubiquitin system [BR:
gmx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100793917
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
ANAPC4_WD40
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_SCAP
TPR_2
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
100793917
NCBI-ProteinID:
XP_040870824
UniProt:
I1JV48
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All DBs
Position
4:8211875..8232620
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AA seq
762 aa
AA seq
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MDSVPFRDGSIHTILDSRYFHSPLDVSHSLHTHSSLIRRLSQETELEGHTGCVNAVAWNS
KGSILISGSDDLRINIWSYSGWKLLHSIDTGHTANIFCTKFIPETSDELVASGAGDAGVR
LFNLSRLSGSGFSDNAIIAPSAHYQCHTRRVKKLAVENGNPNVVWSASEDGTLRQHDFRE
GTSCPPAGSSHQECRNILLDLRSGSKRSLADPPKQVLALKSCDISSTRPHLLLVGGSDAF
ARLYDRRMLPPLSSCWKRMSPPPCVNYFCPMHLSDHGHPSLHLTHVTFSPDGHEVLLSYS
GEHVYLMNVNHAGVNEMQYTSGDNSKLMTYSPTINGTEMQPCVSNVFPNGFPIKKNIAAK
LDKCRKLIKYAKKSLDNGTPYYGIDACNEVLNGYSHIIGPALKHECLCTRAALLVKRKWK
NDAHMVIRDCYAAREIDNSSYKALYYMSEALSQLGRHEDALEFAVASHSLAPSKSEVAER
VANVKRDIALAEAEKSSKTNDGASRFDSRGGRILSLSDILYRPGSNGDPPQDGSRLERDD
SDYDEELELDFETSISGDEEHDLESNILHGSLNLRIHRRGDSRDNARASGSCESPSSSSQ
NSRTSYQPEPAVDMKQRFVGHCNIGTDIKQASFLGQRGEYVASGSDDGRWYIWEKRTGRL
IKMLNGDESVVNCVQCHPFDFVVATSGIDSTIKIWTPNAPVPSSVAGGSAGPETGDVLVA
MESNQQKLSRSHNSILPFLEPFRMQEFPEGPLRLRPFECAQS
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggactccgttccgtttcgcgatggcagcatacacaccattctcgactcccgatatttt
cactctccgctggatgttagtcatagtttgcacactcattcctcgttgattcggaggctt
tctcaagaaacggagttagagggtcacactggctgtgtcaatgcggtggcttggaattcc
aaaggttcgatactgatatccggatcagatgatttacggatcaatatttggagctattct
ggctggaaacttttacattcaattgacacaggacatactgcaaatatattctgtactaag
tttataccagaaacttctgatgagcttgtagcctctggagctggagatgctggagtccgg
ttatttaatttgtctcgcttaagtgggagtggatttagtgacaatgccatcattgctcca
tctgcacattaccaatgtcacactcgaagagtcaagaaattggctgttgaaaatggaaac
cccaatgtagtatggagtgctagtgaagatgggaccctaaggcaacatgattttcgggaa
ggtacctcttgtcctccagctggatcttcgcaccaagagtgtcgaaatattcttcttgac
ttacgaagtggatctaaaaggtcacttgctgatcctcctaaacaagtccttgctttaaaa
tcttgtgatattagttcaactagaccacatttgcttcttgttggtgggagtgatgccttc
gcacgcttatatgatagaaggatgctgccgcctcttagctcatgttggaaaagaatgtct
ccacctccttgtgttaattatttctgtccaatgcatctttctgatcatggacatccaagc
ttgcacttaactcatgttacattcagtcctgatggacacgaggttctcctcagctatagt
ggagagcacgtttacttgatgaatgtaaatcatgctggagtgaatgagatgcaatatact
tcaggagataattcaaagctgatgacatactctccaacaattaatgggacagagatgcag
ccttgtgtatctaatgtcttcccaaatggatttcctattaaaaagaacatcgctgcaaag
cttgacaagtgcaggaaactaataaaatatgctaagaaatcattggacaatgggacaccc
tattatggaattgatgcatgtaatgaggttttgaatggctatagccatattattgggcct
gcactgaaacatgaatgcttgtgtactcgtgctgcactattggtcaagaggaagtggaaa
aacgatgctcatatggttataagagactgctatgctgcaagggaaattgataattcctct
tacaaagcactatactatatgtcagaagcattgtcacagttgggtagacatgaagatgct
ttggagtttgctgttgcttcccattcattggccccatccaaatctgaagttgcagaaaga
gtagcgaatgtgaagagggacattgctttggctgaagctgaaaaaagtagtaagaccaat
gatggggcatcaaggtttgatagtaggggtggacgaatattatcattaagtgacatactc
tatcgtcctgggtctaatggtgatcctccacaagatggttcaagattagagagggatgat
tctgattatgacgaggaattggagttggactttgaaacatcaatatctggtgatgaggaa
catgatcttgaatcaaatattcttcatggaagtttaaatcttagaattcatcggagaggt
gactccagagacaatgctcgtgcaagtggctcatgcgaatcaccttcatcctcgtcacag
aacagtagaacttcttatcagcctgaaccagctgttgatatgaaacagagatttgttggc
cactgcaatattgggactgacataaaacaagccagttttcttggtcaaagaggtgaatat
gttgctagtggaagtgatgatggcagatggtatatttgggaaaagcgtacgggcagactc
ataaaaatgctgaatggtgatgaatctgttgtaaattgtgttcaatgccatccatttgat
tttgttgttgcaaccagtgggattgatagcacaataaagatatggactccaaatgctcct
gttccatcttctgtagctggtggttcagcaggaccagaaactggcgatgtgttggttgct
atggagagcaatcaacaaaaactatctcgtagccataattctatcttgccatttttggaa
ccgtttagaatgcaggagtttcctgaagggccattacgcttgcgtccgtttgaatgtgct
caaagctaa
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