Glycine max (soybean): 100794516
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Entry
100794516 CDS
T01710
Name
(RefSeq) uncharacterized protein LOC100794516
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100794516
Enzymes [BR:
gmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100794516
5.6.2.5 RNA 5'-3' helicase
100794516
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100794516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
UvrD_C_2
AAA_16
Motif
Other DBs
NCBI-GeneID:
100794516
NCBI-ProteinID:
XP_006598823
UniProt:
K7MEG5
LinkDB
All DBs
Position
16:complement(549448..557647)
Genome browser
AA seq
1387 aa
AA seq
DB search
MGSRGRPLFDLNEPPAEDNDEREGIVCFQPQKTHPSTNPHTSDLFATSSAAQGIINNHAF
SHASSVSGFQPFVRPKSTGVPELDAESKTAGDQDAKVSSKDEVRVMDSRILSSANAQSTE
REEGEWSDEEGGFANANGGNNAIANGGNNAIANGGNNLPQRSQASEEPATSGMVDGGVAV
ASDSKSRNIKSSDSINDEKSSHASIGLESNSSEQKSNSIPNLESNIKSEASIDAQEEPPL
IPKPKEVKGIEASHALRCANNPGKRRIDQRKEEMLGKKRNRQTMFLNLEDVKQAGPIKTS
TPRRQTFSSPVISRTIKEVRTVPAQVERVGIAKDQKLTDTSSAEGGNHAEAQEPKSDCNG
DTSGPLVRSRRLNSETEPPTEGNLPPIPRQGSWKQLSDSRQQKNVFHSNRKSGLSGQSSN
DVKLVNKKHLSIKKQTPISSQSQDTSVERLIREVTSEKFWHHPEETELQCVPGRFESVEE
YARVFEPLLFEECRAQLYSTWEESTETVSRDTHIMVRVKANESRERGWYDVKVLPVHEFK
WSFKEGDVAILSSPRPGSVRSKQNSSSLAQDDGESEVTGRVVGTVRRHIPIDTRDPPGAI
LHYYVGDSYDPSRVDDDHIIRKLQAGSIWYLTVLGSLATTQREYIALHAFRRLNLQMQTA
ILQPSPEHFPKYEQQTPAMPECFTQNFVEYLRRTFNEPQLAAIQWAAMHTAAGTSSGTTK
RQEPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQHYYTSLLKHVAPESYKQVNEINSDN
APTGSIDEVLQNMDQNLLRTLPKLVPKPRMLVCAPSNAATDELLARVLDRGFIDGEMKVY
RPDVARVGVDSQTRAAQAVSVERRTEQLLVKSREEIMGWMHQLKNREAQLVQQLHGLHRE
LNATAAAVRSQGSVGVDPDLLMARDQNRDALLQNLAAVVENRDKVLVEMSRLALLESRFR
PGSGFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAI
LPPLSLGAARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHP
QIRDFPSRYFYQGRLTDSESVAKLPDEPYYKDPLLRPYIFYDIRHGRESHRGGSVSYQNI
HEAQFCLRLYEHVQKTVKSLGLGKITVGIITPYKLQLKCLQREFDEVLNSEEGKDLYINT
VDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALLQSEDWA
ALINDAKSRNCYMDMDSLPKDFLVSKAPVYTSLPGKPSSNMRGMRSGGPRYRSMDMHMES
RLGPPSEDDENMGAPVSSRNGNHRQLRYSMENSLDDVEHGGDKSRDAWQYGIQKKHNSSG
TMGKRDV
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgggttctcgaggaaggccattatttgatctcaacgagccacctgccgaggataatgat
gagagggaaggtattgtctgcttccagccccaaaagacacatccatcaacaaatccacac
acgtctgacttatttgcaacatcatctgctgcccaaggaataataaataatcatgctttt
tcacatgcctcatctgtctctggatttcaaccttttgttcggcctaaatccactggtgtc
cctgaattggatgctgaatccaagacagcaggagatcaggatgcaaaagtttcctctaaa
gatgaagtgagagttatggattcacggatattaagttcggcaaatgctcaatctacagag
agggaagagggggaatggtctgatgaggagggcggctttgctaatgcaaatggaggtaat
aatgctattgcaaatggaggtaataatgctattgcaaatggaggtaataatttgccacaa
cgaagtcaagcttcagaagagccagcaacttctggaatggtggatgggggtgttgcagtg
gcttctgacagtaagtctagaaatattaagagttctgatagtataaatgatgaaaagagt
agccatgcttctataggtctagaatcaaactctagtgaacagaaaagcaatagtattcca
aatttagaaagcaatataaaaagtgaagcttctattgatgcacaggaggaacccccttta
atccccaagccaaaagaagtgaaaggtattgaagcaagtcatgcacttaggtgtgctaat
aatcctgggaagaggaggattgaccaacgtaaagaagaaatgttgggaaagaaacgtaat
agacagactatgtttcttaacttggaagatgtgaagcaagcaggtcctattaaaacctca
acccctagaaggcagaccttctcatcacctgtcataagtcgtaccataaaggaagtccgc
actgttcctgcacaagttgagcgtgttggaatagctaaggatcagaagctcaccgacaca
tcttctgctgaaggtggcaatcatgctgaagcacaagagcctaaatctgattgtaatggt
gatacttctggaccactagttagatctaggaggttaaacagtgagacagaacctcctaca
gagggcaatttaccacccattccaagacagggttcatggaaacaactgtcagattcaagg
cagcagaagaatgtattccattctaataggaagtcgggactgagtggtcaaagctccaat
gatgtcaaattggtaaacaagaaacatctttctatcaagaagcagacacctatcagcagc
cagtcccaggacacttctgttgaacgccttatacgggaggtgaccagtgaaaagttttgg
catcacccagaggagactgagctacagtgtgttcctggacgatttgaatcagtagaagag
tatgctagagtatttgagcctttgctgtttgaagaatgccgtgctcaactttacagtacc
tgggaagaatcaacggaaacagtttcaagggatactcatattatggtgcgagtgaaggca
aatgagtcaagagaaagaggttggtatgatgtgaaggttcttccagtacatgagttcaag
tggtcatttaaggagggtgatgttgcaatcctttcatcccctaggcctggatcagttaga
tccaagcagaatagttcttctttagctcaggatgatggggaatcagaagtcactgggcgt
gtggttggtactgttaggcgtcacatacctattgatacccgtgatcctcctggtgcaatt
ttacattactatgttggagactcttatgaccccagcagggttgatgatgatcatatcata
agaaaacttcaagctggaagcatctggtatctcacagtgcttggttctcttgctaccaca
cagagggagtatattgccctacatgcatttcgtcgcttaaatttgcagatgcaaactgca
atccttcaacctagtcctgaacacttccctaaatatgagcaacagaccccagccatgcct
gaatgcttcacacagaactttgttgagtatctgcgtaggaccttcaatgaaccccagttg
gcagcaatccaatgggcagcaatgcatacagcagcaggtactagtagtggaacgacaaag
aggcaagaaccttggccatttacccttgttcaaggacctccaggaacaggaaaaacacat
acagtatggggaatgttgaatgtcattcaccttgtgcagtatcagcactactacacctct
ttacttaagcatgtagcccctgagagctacaagcaagtcaatgagatcaattcagataat
gccccaactggatctattgatgaagttcttcaaaacatggaccagaatctcttgcgaact
ttacctaaattggtcccaaaacctagaatgttagtttgtgctccttctaatgctgccacc
gatgagcttcttgcccgtgttcttgatcgtggatttattgatggagagatgaaagtatat
cgacctgatgtggctcgagttggggttgattctcagacacgtgctgcccaagcagtttca
gttgagcgtagaactgaacagcttcttgtcaagagtcgggaagaaattatgggatggatg
caccagttaaagaatcgtgaagcgcaattggttcagcagttgcatggtcttcatagagaa
ctaaatgctactgctgctgctgttcgttcccaaggatctgttggtgttgatcctgacctt
ctcatggccagagatcagaacagagatgctttgctacagaaccttgctgctgtggttgaa
aacagggataaggttttggttgagatgtctcgccttgcccttttggaaagtaggttccgt
cctggtagcggttttaatttggaagaggcccgtgctagtttggaggccagttttgcaaat
gaagcagagatagttttcactacagtttctagtagtggtcgcaagttgttttctcgtctt
tcccatggttttgatatggtggtcattgatgaggcagcccaagccagtgaggtggcaatt
ctgcccccactctctcttggtgcagcacgatgtgttcttgttggagatcctcagcagctt
cctgctacagttataagcaaggctgctggaacattgatgtacagtaggagtctttttgaa
aggttccaacaagcaggatgcccgacaatgttgttgtctgtgcagtatagaatgcacccc
cagattcgggatttcccttctaggtacttctatcagggacgccttactgatagtgaaagt
gtggctaaattgcctgatgagccatactacaaggaccctttacttagaccatatatattc
tatgacatcagacatgggcgcgagtctcacagaggtggatcagtgtcttatcaaaacata
catgaagcacaattttgtctccgactgtatgagcatgttcagaaaacagtgaagtctttg
ggtttaggaaagattactgttggcataattactccttataagctgcagttgaaatgcctc
cagcgtgagtttgacgaagtcttaaattcagaagaagggaaggatctatatatcaacaca
gtagatgccttccaaggtcaagaacgggatgtcattataatgtcttgtgtgcgtgcatcc
agtcatggtgttggctttgttgcagatatacgtcgaatgaatgttgcccttacgcgtgcg
cgaagggccctttgggtcatgggaaatgcaaatgctctgctgcaatctgaagattgggct
gcgttgattaatgatgcaaaatctcggaattgctacatggacatggactctcttcctaag
gactttctggtatctaaggcacctgtttacacatcattgcctggtaagccttcctcaaat
atgaggggcatgagatcaggtggaccaagatatagatcaatggacatgcatatggagtca
aggttaggaccaccatcagaagatgatgagaatatgggtgctccagttagctccagaaat
gggaaccatcgtcaattgcggtattcaatggagaattctttagatgatgttgagcatggg
ggtgacaaatcaagagatgcctggcagtatggaatacaaaagaagcataactcatctgga
accatgggaaagagagacgtataa
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integrated database retrieval system
