Glycine max (soybean): 100794865
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Entry
100794865 CDS
T01710
Name
(RefSeq) phytochrome B-2 isoform X2
KO
K12121
phytochrome B
Organism
gmx
Glycine max (soybean)
Pathway
gmx04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
100794865
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
PAS_4
HisKA
PAS_9
PAS_8
PAS_3
DUF3292
Motif
Other DBs
NCBI-GeneID:
100794865
NCBI-ProteinID:
XP_006597696
UniProt:
I1MGE5
Structure
PDB
PDBj
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All DBs
Position
15:complement(11428214..11435244)
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AA seq
1149 aa
AA seq
DB search
MASASGAENSSVPPSPLPPPPPPQIHTSRTKLSHHHHNNNNNNNNNIDSTSKAIAQYTED
ARLHAVFEQSGESGRSFDYSQSIRVTSESVPEQQITAYLLKIQRGGFIQPFGSMIAVDEP
SFRILAYSDNARDMLGITPQSVPSLDDKNDAAFALGTDIRTLFTHSSAVLLEKAFSAREI
SLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQ
LQSLPGGDVKLLCDTVVESVRELTGYDRVMVYRFHEDEHGEVVAETKRPDLEPYIGLHYP
ATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLRAPHGCHAQYMAN
MGSTASLVMAVIINGNDEEGVGGRTSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGL
QLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGNY
YPLGVTPTEAQIRDIIEWLLAFHRDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITEK
DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAI
HSLQLILRDSFKDAEHSNSKAVLDPRMSELELQGVDELSSVAREMVRLIETATAPIFAVD
VDGRINGWNAKVSELTGLPVEEAMGKSLVRDLVFKESEETVDKLLSRALKGEEDKNVEIK
MRTFGPEHQNKAVFVVVNACSSKDYTNNVVGVCFVGQDVTGQKIVMDKFINIQGDYKAIV
HNPNPLIPPIFASDDNTCCLEWNTAMEKLTGWSRADVIGKMLVGEVFGSCCQLKGSDSIT
KFMIVLHNALGGHDTDRFPFSFLDRYGKHVQAFLTANKRVNMDGQIIGAFCFLQIVSPEL
QQALKAQRQQEKNSFARMKELAYICQGVKNPLSGIRFTNSLLEATCLSNEQKQFLETSAA
CEKQMLKIIHDVDIESIEDGSLELEKGEFLLGNVINAVVSQVMLLLRERNLQLIRDIPEE
IKTLAVYGDQLRIQQVLSDFLLNIVRYAPSPDGWVEIHVHPRIKQISDGLTLLHAEFRMV
CPGEGLPPELIQNMFNNSGWGTQEGLGLSMSRKILKLMNGEVQYIREAQRCYFYVLLELP
VTRRSSKKC
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagcaagcggagcggagaattcctccgtcccgccgtcgccgttgccgcctccg
ccgccgccgcaaatccacacctcgcggacgaagctgagccaccaccaccacaacaacaac
aacaacaacaacaacaacatcgactccacgagcaaggccatcgcgcagtacacggaggac
gcgcggctccacgccgtctttgagcagtccggcgagtccgggaggtcctttgactactcc
caatcaatccgcgtcacatcggaatccgtcccggagcagcagataacggcttaccttctc
aaaattcagcgcggcggcttcatccagcccttcggctccatgatcgccgtcgacgagccc
tccttccgcatccttgcctactccgacaacgcccgtgacatgctcggcattactccacag
tccgtcccttcgctcgacgacaagaacgacgccgccttcgcgctcggaaccgatatccga
accctcttcactcactccagcgccgttctcctcgaaaaggccttctccgcgcgcgaaatt
agcctcatgaaccctatctggattcactccagaacctccgggaagcctttctatggaatc
ctccaccgaattgacgtcggaattgtcatcgatttggagcctgcgcggacggaggatcct
gccctctccatcgccggagctgtccagtcgcagaagctcgcggttcgcgcgatttcgcag
cttcaatctctccccggtggcgatgttaagcttctttgtgatactgttgttgagagtgtc
agggaattgacagggtatgatagggttatggtttataggtttcatgaggatgagcatggg
gaggttgttgctgagactaagaggcctgatttggagccttacattggattgcattatccc
gctactgatattcctcaggcttctaggtttttgtttaagcagaatagggttaggatgatt
gtggattgtcatgcttctgctgtgagggtggtgcaggatgaggctcttgtgcagcctctg
tgtttggttgggtccacgctcagggcgcctcacggttgccatgctcagtatatggctaac
atgggctcgactgcgtcgttggtgatggctgttattatcaatgggaatgatgaggaaggt
gttggtggccgcacttcgatgaggttgtgggggcttgttgtttgccaccatacctctgct
aggtgtattccttttcccttgaggtatgcttgtgagtttctgatgcaggcgtttgggctg
cagttgaacatggagcttcagttggccgcacagtcgttggagaagcgggttttgaggaca
cagactctgttgtgtgatatgcttctcagggactctcctactggcattgtaactcagagt
cctagtattatggacttggtgaagtgtgacggagctgctctttattaccaagggaactat
tatccgttgggtgtgactccaactgaggctcagataagggatattattgagtggttgttg
gcctttcatagagattcgactggtttgagtactgatagtctggctgatgctggctatcct
ggggctgcctcgcttggggatgcagtttgtgggatggcggttgcttatattacagagaag
gattttcttttctggttcaggtcgcacacggcgaaagagatcaaatggggtggtgcaaag
catcatcctgaggacaaggatgatgggcagagaatgcatccccgttcttccttcaaggca
tttttagaagtggtgaaaagccgtagcttgccgtgggagaatgcggaaatggatgcaatt
cactctttgcagcttattctgcgtgactcgtttaaagatgctgagcatagcaattctaag
gctgttttggatccccgtatgtcggaactagagttgcaaggggtcgatgaactaagttct
gtagccagagagatggttagattgatcgaaacagccactgctccaatatttgctgttgat
gttgatggccgcataaatgggtggaatgcaaaggtttcagaattgacaggactcccagtt
gaggaggctatggggaagtccttggttcgcgatcttgtgtttaaggagtctgaagaaact
gtggacaagcttctttctcgtgctttaaaaggtgaagaagataagaatgttgagataaaa
atgaggacgtttggcccagaacatcaaaataaggcagtttttgtagtggtgaatgcttgc
tccagcaaggattatacaaataatgtagttggagtgtgctttgttggtcaggatgttact
ggtcaaaaaattgtgatggacaaattcatcaacatacaaggcgactacaaggctattgta
cataatccaaatcctttgatccctcccatttttgcatcggatgataacacgtgttgctta
gagtggaacactgcaatggaaaagcttactggttggagccgcgcggatgtcattggaaaa
atgttggtgggagaggttttcggcagttgctgtcagttgaagggttcagattcaataaca
aagttcatgattgtcttacacaatgcgcttggtggacatgatacagatagattccctttt
tcatttcttgatcggtatggcaagcatgtgcaagctttcctgactgcaaataagagggtt
aacatggatggtcagatcattggggcattttgctttttgcaaattgtgagtccggaactt
caacaggctctgaaggcacagagacaacaagagaagaattcatttgctaggatgaaagag
ttagcttatatttgtcaaggagttaagaatcctttgagtggcatacgctttacaaactct
cttttggaggctacatgcttgtccaatgagcaaaaacagtttcttgagactagtgctgct
tgtgagaagcaaatgttaaagataatacacgatgttgatattgaaagcattgaggatggg
tccctggagcttgaaaagggggaattcttgcttggaaatgtcataaatgcagttgttagc
caagtaatgctactgttaagagaaagaaatttacagttgattcgtgatattcctgaagaa
atcaagacattggctgtttatggtgatcaattgaggattcaacaagtgttgtctgatttc
ttattgaatatagtgcgctatgcaccatctccagatggctgggtagagattcatgtacat
ccaagaataaaacaaatctcagatgggctcactcttctccatgctgaatttagaatggta
tgtcctggtgaaggtcttcctcctgaattgattcaaaacatgttcaataacagtgggtgg
gggactcaagaaggtttagggctgagcatgagcaggaagattctaaagctaatgaacggc
gaagtgcagtatatcagggaggcccaacggtgctacttctatgttcttcttgaactacct
gtgacacggagaagctctaaaaagtgttaa
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