Glycine max (soybean): 100795032
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Entry
100795032 CDS
T01710
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03013
Nucleocytoplasmic transport
gmx03015
mRNA surveillance pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100795032
09122 Translation
03013 Nucleocytoplasmic transport
100795032
03015 mRNA surveillance pathway
100795032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100795032
03041 Spliceosome [BR:
gmx03041
]
100795032
03009 Ribosome biogenesis [BR:
gmx03009
]
100795032
03012 Translation factors [BR:
gmx03012
]
100795032
Enzymes [BR:
gmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100795032
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100795032
mRNA cycle factors
Stress granule specific factors
100795032
Spliceosome [BR:
gmx03041
]
Complex C
Other components
EJC/TREX
100795032
Ribosome biogenesis [BR:
gmx03009
]
Eukaryotic type
90S particles
Helicases
100795032
Translation factors [BR:
gmx03012
]
Eukaryotic type
Initiation factors
eIF-4
100795032
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
TniB
Motif
Other DBs
NCBI-GeneID:
100795032
NCBI-ProteinID:
XP_003546395
UniProt:
A0A0R0GBB6
LinkDB
All DBs
Position
15:complement(13369297..13373568)
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AA seq
406 aa
AA seq
DB search
MATTSVVPANRRRAANPAEEMDFETTEGVKAIASFEEMGIKDDLLRGIYQYGFEKPSAIQ
QRAVTPIIQGRDVIAQAQSGTGKTSMIALTVCQVVDTSVREVQALILSPTRELASQTEKV
ILAIGDFINIQAHACVGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAIKMLV
LDESDEMLSRGFKDQIYDVYRYLPPDLQVCLISATLPHEILEMTNKFMTDPVRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRNNNFTVS
SMHGDMPQKERDAIMGEFRAGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRI
GRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgacgtcggtggtgccggcgaaccggcgtcgcgcggcgaaccccgcggaggag
atggacttcgagacgacggagggcgtgaaggccatcgcaagcttcgaggagatggggatc
aaggacgatctgctccgcggaatctaccagtacggcttcgagaagccctccgccattcag
cagcgggccgtcacgcccatcattcagggccgtgacgtcatcgctcaggcccaatccgga
acggggaaaacgtccatgattgctctcaccgtttgccaggtcgtcgatacctccgtcaga
gaggttcaggcattgatattgtcaccaacgagggaactggcctcacagactgagaaagtt
atattggctattggggatttcattaatatacaagctcatgcatgcgttggtggtaaaagt
gtgggagaagatataaggaaacttgagtatggagttcatgtggtgtctggaactcctggc
cgagtttgtgacatgatcaaaaggagaacattgcgcacgagagctatcaagatgctagtt
cttgatgaatctgatgaaatgttgagcagagggtttaaagatcaaatttatgatgtgtat
agatatctcccacccgaccttcaggtttgcttgatttctgctacccttcctcatgaaata
ctggagatgacaaacaaattcatgacagatccagtaaggatccttgtaaaacgtgatgaa
ttgacattggagggcatcaaacaattttttgttgccgttgaaagggaggaatggaagttt
gataccctgtgtgatctttatgataccctcactatcactcaagctgttatattctgtaac
actaagcgaaaggtggactggttaactgaaaaaatgcgtaacaataatttcactgtctca
tcaatgcatggtgacatgcctcagaaagaaagagatgctattatgggagaatttcgtgct
ggaacaacccgtgtactaataacaactgatgtttgggcccgtggtcttgatgtacagcag
gtttctctagttatcaattatgaccttccaaataatcgtgagctttacattcatcgaatt
ggccgttctggacgttttggaagaaagggtgttgcgataaattttgtgaagagcgatgac
atcaagatcttgagagacattgaacaatactacagtactcagattgatgaaatgccaatg
aatgttgctgatcttatataa
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