Glycine max (soybean): 100795225
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Entry
100795225 CDS
T01710
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC100795225
KO
K24155
rabconnectin-3a
Organism
gmx
Glycine max (soybean)
Pathway
gmx04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100795225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmx04131
]
100795225
Membrane trafficking [BR:
gmx04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100795225
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
100795225
RAVE complex
100795225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_IFT140_1st
Beta-prop_WDR5
Beta-prop_Aladin
Motif
Other DBs
NCBI-GeneID:
100795225
NCBI-ProteinID:
XP_014624361
LinkDB
All DBs
Position
16:2205494..2221553
Genome browser
AA seq
2360 aa
AA seq
DB search
MREAEKMNPIDHLPLRLLRSDTVPPAPTLSESTVDFLPDFSGYSWIAYAASSLLTISHFP
SPLSPHQTRIGPIFRQSFQLSADPLAAVAWSPSSPSSGDLAAAADNCISLFRHDSATAKG
SFCWSQNAVLVQHTKVANIRWTGSGDGIISVGMEVVFWKKSNKCWEVAWKFKADQPQTLV
CATWFIEGPSATAAHPSKEHIEGSLTNEKSKCVLVCQSNGLSEYSKVKLHHPLPVVMIQW
RPSRGKLSNRYGKCSVRHVLLTCSLDGTARLWSEIDNGKARRTGKDINDQKNTGCSFCVV
AVIEINQSLNGTLGSDIFVRWGTDFEGIFRTGEEAAKQVFSKEGFEHDVRNCDWLVGFGP
GMLLSFWAVQCLDDVSPLRFPRVTLWNKHEIQNHDIANVYKFNSSDFKNAFFLHKIIILR
SSLSGPPIICSSLQLLPCNSLVWSNFRIQMIHDAVEKSIDNVNTDNISSHLTGGVLNLDG
HSGRILKVSLHPCTSKVQLAVSLDSNGLLLFWSLSNISNCILGCPTLVPTMELYGKLATQ
DSCSLYTSLTWAPSILDDKLVFFMGHTRGIDCFIVNICQSEEENIECHYLCTIPFSGHGP
YEDGPFDIFTIPLNSTCDKTFRNNKLMLLAIWMGRFQALSWEVNLHSFDMSTNCCECNFD
VKSIDNCSVWAFESTFANKKYCITVNPCSCEFLSSNDLVTSFAVADSGTLSHRQQEFGLA
NDLCSSYPAYILATGSSDGILKLWKSKPGNSLTQHLPWELVGSFVAHDGPIKDICLADCG
EKIATFCYESNSNAINTIHIWDAVPLISAGTFILEDKIKTESDVIALKWLPLGTGELLLG
VCLQNELHVYAPKRCVGTTLSNSVNFPKKNIWVRIAYAHTSIPIYDFLWGPRAAAVVIHG
NYFSIFSHWLFHEDKRQGSKFRPGDSKPNTYNCEDEIYEDILSSVFTEYDIGAFREQSLG
DSHADFDSVQSSKINMKDNSSSLFLAKEQLKSELLTKVGLWSILEVAEIISGSLPTYHPD
VLLTNISSGNWKRAYVAVRHLVECLTSYDTKKRHISKRIGLPNILLSYYLEGCISKGSQP
KGFQWGGDAALITSISQAQSSLFRFPYHSDSSVENESISSSTKSELNDFIESLEKFPDLP
FLVDIEKTQILAIIDLLSEVSSPHSSSAYQSLDEPGRRFWVALRFWQLLFLRKFARAASF
EELPADSRLFVWAYHSDCLDNLFGSVIPNEPSWQEMRALGMGFWYANIPQLRARMEKLAR
AQYLKNKNPKDCALLYIALNRVQVLAGLFKISKDEKDKPLVGFLSRNFQDEKNKAAALKN
AYVLLGKHQLELAIAFFLLGGDHSSAINICAKNLGDEQLALVICRLVEGHGGSLEHHLIT
KYILPSAIDKGDYWLASLLEWEMGNYYQSFYRMLEFSVNPVPWESTVMSNCGPFLDPTVG
FYCQMLATKNSMRNAVGEQNSAILLRWATLMTVAALKRCGNPLEALEYFSSSLSMSETAD
QESELGDSHDVLSSTLKPLPRKCSNWLSANVSVHLEFHIKLNLALCYLSKLIKEHPSWPD
TFAEYNGEASYSDEYMMQYAKSVESFKQKLYTGLALFEQRFLLAPHCLISMILLLLFHHG
SLYIRYDMTDGCIQGELSQKKSNIFDDFNLYYSWIKPLFKTAEEVSFFYSRFFCACSMEN
SQQNSSIDSKPKFLDALQCRFEGVLISLWFFRAILRIQLSSICKDLVKTHLDILDLYEYY
LHFSLAWLQKNSEALLYMSEPFLVAQSNGRNPYDIDMVNLKKLIPNIGQLLAQTSLMSNI
ENLQLSKCAEDKLVADLKHLIPDDERWKILGTCLWQHFSRFMISNLNLVLAKLEDGNLSG
PSTENILMXESYLINMDSESISLPEKIRLVSFSLCDLLMTTVTHISSYHVKQHAEFLWQK
VGNDLNVMTLKWLTQKSEFSQNQNLDILEQGNRKDNYSVHQLLWDHCADPKLISDCFAQE
KLNWPNDLDQMNTKGWNDLSIIMTGLHKTDDTCGDGCKFSTGSSNHEVGTPVKGTSLSGH
AFARTNQKDISYTNFAVFQSPREMYKRNGELLEALCINSTDQREAAVAGNRKGIMFFHLE
DEIPFSAKSDDLLWATADWPQNGWAGSESTPAPTCVSPGVGLGSKKGAHLGLDGATIGVD
SSDWPSNDLTGGKVLGRLGYTGIGASGLGWEVQQDFEDFVDPPATLENISTRALSSHPMR
PFFLVGSSNTHIYLWEFNKDKATATYGVLPAANVPPPYALASISALQFDHFGHRFASAAL
DGTVCTWQLEVGGRSNVRPTESSLCFNGHASDVTYFSSSGSIIAVAGYSSNGVNVVIWDT
LAPPTTSRASILCHEGLSLN
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atgagagaagcagagaagatgaatcccatcgatcatcttcccctccgtctcctcagatcc
gacacggtcccgcccgccccaaccttgtccgaatccacggtggattttctccctgacttc
tccggctactcctggatcgcctacgccgcttcttcacttctcaccatctcccacttccct
tcccctctttcccctcaccaaacccgcatcggccccattttccgccaatccttccagctc
tccgccgatcccctcgccgccgtcgcctggtcccctagttccccctcctccggcgacctc
gccgccgccgccgataactgcatctcgcttttccgccacgactccgccaccgctaaaggt
tctttttgttggagccagaatgcagtgcttgtacaacatacgaaagtggcaaacatcaga
tggacaggatcgggagatggaataatttctgttggaatggaggtggttttctggaaaaag
agtaacaaatgttgggaagttgcttggaagtttaaagcagatcaaccccaaactcttgtt
tgtgcaacttggtttattgagggcccttcagcaactgcagcacatcctagtaaagagcac
attgaagggtccttgaccaatgagaaaagcaaatgtgtattggtatgtcaaagcaacgga
ctatctgaatattcaaaagtcaaactacatcatcctttacctgtcgtaatgattcaatgg
agaccatcaagaggaaagctatcaaacagatatggtaagtgttcagtaaggcatgtcctg
ttgacatgcagcttagatgggactgcaaggttatggagtgaaattgataatggaaaggcc
aggagaactgggaaggacatcaatgatcagaagaacacgggatgctctttttgtgttgtt
gctgttattgagattaatcagtccttaaatggaactcttggttcagatatatttgtgaga
tgggggacagactttgagggaatatttagaactggcgaagaggccgccaaacaagttttt
tccaaagaaggatttgagcatgatgttagaaattgtgattggcttgttgggtttggtcct
ggaatgttgcttagcttttgggctgtccaatgtcttgatgatgtttctccgctgagattc
ccccgagttacgttatggaacaaacatgaaatccagaaccacgacatagcaaatgtttac
aagtttaactcatctgattttaaaaatgcattttttcttcataagatcattatattgaga
agttccctgtctggtccaccgattatatgctcttcacttcagctattgccttgtaattcc
ttagtttggtcaaattttcgtattcaaatgatacatgatgctgtggagaaatccattgat
aatgttaacacagataacatatcctcccatttgactggtggtgttttaaacttagatggt
catagtgggagaatcttaaaggtttcacttcatccttgtacaagcaaagttcaattagct
gtttctctggattctaatggactgcttcttttttggtcactttctaacatttcaaactgc
attttgggatgtccaactttggttcctactatggaactctatggaaagcttgcaactcaa
gactcatgttccttgtacacaagcttgacatgggcaccttcaatacttgatgacaagctg
gttttttttatggggcatactcgggggattgattgcttcattgtcaacatttgtcaaagt
gaagaagaaaacatagaatgtcactacttatgtactattcctttcagtggtcatggtcct
tatgaggatggcccttttgatatctttacaattcctttaaattccacttgtgacaaaact
ttccgtaataataaacttatgttattggcaatatggatggggagatttcaggccctatca
tgggaagtaaacttgcactcatttgacatgtcaacaaactgttgtgaatgcaattttgat
gttaaaagcattgataactgcagtgtttgggcatttgaaagtacatttgctaataaaaaa
tattgcattactgtaaatccatgttcatgtgagtttctaagttccaatgatctggttact
agttttgcggtggctgattcaggcactctaagccataggcaacaagagtttggccttgcg
aatgatctgtgtagtagttatcctgcatatatcttggccacaggctcctctgatggcatc
ttgaaactctggaaaagtaaacctggcaactcattgacccagcacttgccatgggagctt
gtgggttcgtttgttgcacatgatggtcccatcaaggatatatgtttagctgattgtggt
gagaagattgccacattctgctacgaaagcaattcaaatgctatcaataccatccatata
tgggatgctgtaccactaatcagtgctgggacttttattttggaggataaaataaagact
gaaagtgatgttattgctctaaagtggttacctttaggaactggggagttattgcttgga
gtttgtttgcaaaatgaattacatgtgtatgctcctaagcgttgtgttggtacaacattg
tcaaactctgtaaattttccaaaaaagaatatatgggttcgcattgcatatgctcacact
tccattccaatttatgatttcttgtggggacccagagctgcagcagtggtgattcatgga
aattactttagtatatttagtcattggttgttccatgaggataaaaggcaagggagtaaa
tttcgtcccggtgattcaaagcctaatacctataattgcgaggatgaaatatatgaagac
atactttcttcagtttttactgaatatgacattggtgctttcagagaacagtcacttgga
gacagtcatgcagattttgattctgtgcagtccagcaaaatcaatatgaaggacaattcc
agtagcttgtttctggccaaggaacaattaaaatctgaacttcttaccaaggttggttta
tggagcatcttagaagtagctgagataattagtggatcattgcctacttatcaccctgat
gtactacttactaatataagctcaggaaactggaaacgtgcttatgtagctgtgaggcat
cttgttgaatgcctgactagttatgatactaaaaagagacacatctccaagagaattggc
cttccaaatattttattgtcatattatctagaaggctgtatatcaaaaggttcccaacct
aagggattccagtggggcggggacgctgcattgatcacatcaatttcacaggctcagagt
agcttgttccggtttccatatcattcagattccagtgttgaaaatgaaagcatttcctca
tcaacaaaatccgagcttaatgactttattgaatctcttgagaaatttcctgatttacca
tttttggtcgacatagagaagacgcagattcttgcaattatagatctgcttagtgaagtt
agtagtcctcactcatcttctgcatatcagagtcttgatgaacctggacggaggttttgg
gttgcactaagattttggcaactgctttttctccgaaagtttgccagagctgcatctttt
gaagagttgcccgctgactcaaggttatttgtatgggcttatcattctgattgcctagat
aatttatttggttctgtcatacccaatgaaccatcatggcaagaaatgcgtgctttgggt
atgggcttttggtatgctaatatacctcaattgcgtgcaaggatggagaaattggcaaga
gctcagtatttgaagaacaaaaatcctaaggattgtgctttgctgtatattgcactgaat
agagttcaagttttggctggccttttcaaaatcagtaaggatgagaaggataagcctcta
gtgggcttcctttctcgcaattttcaggatgagaaaaacaaagctgctgctttaaaaaat
gcttatgtcttacttggaaagcatcagctggaattagcaattgctttctttttgcttgga
ggtgatcactcttctgctataaatatttgtgctaagaatcttggggatgaacagcttgcc
ctagtcatttgtcgtcttgttgagggtcatggtggatcattggagcatcatctaattaca
aagtacatacttccatctgcaattgataaaggagactactggcttgcaagccttctggag
tgggaaatgggtaattactaccaatctttttatagaatgctagagttttcagtaaaccct
gtgccttgggagtccactgtcatgtccaattgtggtccttttctggaccccactgttggt
ttttattgccaaatgttagcaacaaagaatagcatgcggaatgcagtgggggagcaaaat
tctgcaattcttttaagatgggcgactttgatgacagttgctgccctaaaaagatgtggt
aatcctcttgaggcgttggaatatttctcgtcttcactgagcatgtctgagactgcagat
caagagagtgaattaggtgacagtcatgatgtgctgtccagtactcttaagcctttgcca
agaaaatgctctaactggttgtctgctaatgtgtctgtgcatctcgagttccatattaaa
ttgaatttggcactttgctacttatcaaaattgataaaagagcatccaagctggcctgac
acttttgcagaatataatggagaagcttcttattctgacgagtacatgatgcaatatgcg
aaatcagttgaaagttttaaacaaaagttatacacaggacttgctctatttgaacagagg
tttttattggctccccactgtctaatcagtatgattttactcttactttttcatcatgga
tcattgtacattagatatgatatgactgatggatgcattcaaggagaactgtctcaaaag
aagagcaatatatttgatgatttcaatttatattactcttggattaaacccctgtttaag
actgcagaagaagtctcctttttctattcaagatttttttgtgcctgcagtatggaaaat
tcgcaacaaaattcatctattgatagtaaacctaagtttttggatgctttgcaatgccgc
tttgaaggtgttttgatttcattgtggttttttagagcaattttgaggatccagttgagt
tctatttgcaaagatcttgtcaaaacacatcttgatatcctggatttgtatgaatattat
ttacatttttcattagcttggcttcaaaaaaactcggaagcgcttttgtatatgtcggaa
ccattcttggttgcacaatctaatggtcgtaatccttatgacattgatatggtgaatctg
aagaagcttatcccaaacattgggcagttgttggctcaaacttctttaatgtctaatata
gaaaaccttcaactatccaaatgtgcagaagataaactagttgcagatctaaagcattta
attcctgacgatgaaagatggaagattttagggacctgcttgtggcagcatttctctaga
ttcatgatatctaatttgaatctggttcttgccaaacttgaagatggtaatttatctggg
ccttccacagaaaatatacttatgngggagtcttatctcataaatatggattctgaaagc
atcagcttgccagagaagattcggttagtctcatttagcctatgtgatctactgatgaca
acggttactcacatttcttcttatcatgttaaacaacatgcagaatttctgtggcagaaa
gtagggaatgatttgaatgtaatgactcttaaatggttaacacaaaaatcagaattcagt
cagaaccaaaacctggacattttagaacaggggaacaggaaagataactattcagttcat
cagttattatgggatcactgtgcggatcccaaattgatatctgattgctttgcacaggaa
aaactcaattggcctaatgacttggatcagatgaatactaaaggttggaatgacttgtct
ataattatgacaggactgcataaaactgatgatacatgtggtgatggatgtaaatttagc
actggatcttctaatcatgaagttggaactcctgttaaaggaacatctctaagtggccat
gcttttgcaagaacaaaccagaaagatatatcttatacaaattttgcagttttccagagt
cccagagaaatgtacaagagaaatggagaacttttggaggcattgtgtataaactctact
gatcaacgggaagctgcagttgctggcaataggaagggtataatgttctttcatctggaa
gatgagattccttttagtgctaaatcagatgatcttttgtgggctacagctgattggcct
cagaatggatgggcaggttcagaatccacccctgctccaacatgtgtttctcctggtgtt
ggccttgggagcaaaaaaggggcacaccttgggctggatggagcaactattggcgtggac
tcttcagattggcccagcaatgacttgacaggtggcaaagtattaggaaggctaggttac
actggtattggtgcctctggattaggttgggaagttcaacaagattttgaagattttgtt
gatccacctgccactttggagaacataagtaccagggctttgtctagtcatccaatgaga
cctttcttcttggttggctctagcaatacacacatttacttgtgggagttcaacaaagac
aaagctactgctacatatggagtgctgcccgctgccaatgtccctccaccttatgccctt
gcatcaatttcagccttacagtttgaccactttggacaccgatttgccagtgctgcatta
gatggaactgtctgcacgtggcagctggaggttggaggaaggagcaatgttcgtccaaca
gaatcatctctttgctttaatggtcatgcatcggacgtcacatatttttcctcaagtgga
tcgataatagctgtggctggatatagctctaatggtgttaatgtggtcatatgggatact
ttagctccacccactacttctcgagcttccattttatgtcatgaaggtctgtctctaaat
tag
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integrated database retrieval system
