Glycine max (soybean): 100796307
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Entry
100796307 CDS
T01710
Name
(RefSeq) probable pectate lyase 3
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00040
Pentose and glucuronate interconversions
gmx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100796307
Enzymes [BR:
gmx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
100796307
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
100796307
NCBI-ProteinID:
XP_006573090
UniProt:
I1J5K9
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Position
1:4656005..4659164
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AA seq
448 aa
AA seq
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MAKIHNFYLLTCLVVMIPTLYANVKEDEAYWKRQSEVLLVDSYWQERASIAEKENQQAYT
SDPYSLTKNLTFSVSEIIIGEKSGRRNLRGRGGKCMATNPIDRCWRCDPNWANNRKKLAD
CVQGFGRNTIGGKNGPFYVVNSSLDNDMVNPAPGTLRHAVTRSGPLWIIFARSMNIRLSQ
ELIMTSDKTIDGRGVDVYIANGAGITIQFIKNVIIHGIKIFNIQVGNGGLIRDSETHYGF
RTYSDGDGISIFGSSNVWIDHVSMRNCKDGLIDAIQGSTAITISNGHFTDHNEVMLFGAS
DSYDGDKIMQITLAFNHFGKRLVQRMPRCRYGFVHVVNNDYTHWEMYAIGGSKHPTIISE
GNRFIAPNNVYAKEITKREYSPEQEWKNWQWRSINDEYMNGAFFREGGSQITDRPFSRQD
MITAKPGSYVGRLTRYAGSLRCIVGKPC
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaattcataatttctaccttttaacctgtttggtagtcatgatacctaccttg
tatgccaatgtcaaagaggatgaagcatattggaagaggcaaagtgaagtacttcttgtt
gattcatattggcaggaaagagcatcaattgctgaaaaagagaaccagcaagcttatact
tctgacccatattcactcaccaagaacttgacctttagtgttagcgaaatcataataggt
gagaagagtggaagaaggaatttgaggggaagaggtggtaaatgcatggcaacaaaccca
attgacaggtgctggaggtgtgatcccaactgggcaaacaatcgcaagaagcttgcagat
tgtgtgcaaggttttggaagaaacactattggtggaaagaatggtccattctatgtggta
aacagtagtttagataatgacatggtgaatcctgctcctggtacccttaggcatgcagtt
acaagaagtggacccttgtggatcatctttgctcgtagcatgaacattaggctcagccag
gagctcattatgacaagtgacaagaccattgatggaagaggagttgatgtctacattgct
aatggggctggtattaccatccagttcatcaagaatgtgatcatccatggaatcaaaatt
tttaacattcaggttggcaatggtggacttattagagattctgagacccactatggtttt
aggacttatagtgatggtgatggcatttccatctttggctccagcaatgtttggattgac
catgtttccatgagaaattgcaaagatggattgatagatgccattcagggttccactgct
attaccatctctaatggccatttcacagaccacaatgaggtgatgttgtttggtgctagt
gacagctatgatggcgataagataatgcagatcacattggcattcaaccactttggcaag
agattagtccaaaggatgccaaggtgcagatatggttttgtccatgtggttaacaacgat
tacactcattgggaaatgtatgccattggtggtagcaagcatcctaccattattagtgag
ggcaacagattcatagcccctaacaacgtatatgctaaagagataacaaagagggagtac
tcaccggagcaagagtggaaaaactggcaatggagatcaatcaatgatgagtacatgaat
ggagcatttttcagagaaggtggttctcagataacagacaggccgttctcaaggcaggac
atgataacagcaaagcctggatcatacgtgggaaggctcactcgttatgctggaagcctt
aggtgcattgttggaaagccttgttga
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