KEGG   Glycine max (soybean): 100796497
Entry
100796497         CDS       T01710                                 
Name
(RefSeq) bromodomain and WD repeat-containing protein 3 isoform X1
  KO
K11797  PH-interacting protein
Organism
gmx  Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gmx04121]
    100796497
Ubiquitin system [BR:gmx04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     100796497
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR75_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_SCAP WDR55 Beta-prop_EML Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_EIPR1 Bromodomain WD40_MABP1-WDR62_1st WD_LRWD1 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th Agenet Auxin_resp
Other DBs
NCBI-GeneID: 100796497
NCBI-ProteinID: XP_006574531
LinkDB
Position
2:1148427..1162635
AA seq 1708 aa
MDSRKGKASVSASSLSAAPLSVSNKVDQMVSPPRDVRAVETDVDIDLREIYFLIMHFLSV
GPCHRTFLNFKEELLEHQLLPRRYHAWFSRSGEPSGDDADEDDDGISLPLDYSNLVGRYP
HITKDHLVKLLKQLMLSTVNPLHGKLEGSSPNAADVPTLLGYGSFSLLNVDRKTADKLVK
PPPLYMRWPHMKANQVQGLSLREIGGGFTKHHRSPSIRSACYAIAKPSTMVQKMQNIKKL
RGHRVAVYCAIFDGSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNAL
VASASNDFVIRVWRLPDGMPISVLRGHTGAVNTITFSPSVIYQLLSSSDDGTCRIWDARN
SHNPRIYVPRPPDAINGKGNAPPASLPSSSNVQQSYQVLCCAYNANGTVFVTGSSDTYAR
VWSALKPNTDDAEQPIHEMDLLSGHENDVNYVQFSGCSVASKILTSDPWKEENTLKFRNF
WYCHDNIVTCSRDGSAIIWVPRSRKSHGKVGRWTRAYHLKVPPPPLPPQPPRGGPRQRFL
PTPRGVNMIIWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHTESSYVLDVHPFNPRI
AMSAGYDGRTIVWDIWEGIPIRTYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYFLNTGQG
ESQKDAKYDQFFLGDYRPLIQDTQGYVLDQVETQLPPHRRNIQEPLCDSSMLPYPEPYQS
QFQQRRLGALGIEWRPSLIKYAVGPDFTVGQDYPVVPLVDLEVMVEPQPEFLDAMFWEPE
YDIIVSDDADSEYNANEDSSSAAGQGSVISSSDLEYSDDSSNRDGLRRSRRKKHNVGVEV
MTSSGRRVRKRNLDECNGNTSGSNRLRKKSKGSSKASKRKSSIAKTLRPQRIAAHNARSM
FSQIDETSTDGEDNDSDEEASDSFQDPDDLSESEREMDNKHLEIKKPLLEKFATVSKPPA
FSESLVNVETRPRLVVKFSLRDSKKNVPTEDTRLACETQDNMVSQSSRPQPEESDQKTFP
DTKSLDPALSSMVATNAELPQSLNGNENDDKEQTENATNNLYAFRYVEANTDQCRKMKTH
THELSRSGDALLTDAEIDDLLEHNANGRSEHVIGKLETVGSMVNTELTDFEDAPKFSSLE
PSLFGNPQPNADGSLTSGYDKFNEGDKGQSGSDKCAEDTLENNEVVHSSHCHDLKMKAPV
KSTKLVIKKKQISADTEGPCKLKIVSSKADSSCARGIGISENSSSMGPNLVTEVPEGEDD
RKFSSPQLLHSYSDKRSYDHFHKRDKSYKGKVNQDGFESFDCDMGEHTSVFSNQHGLGIG
LSDVTSDPMRQTRFIRMKTTSEEPSTSNRRIKIRQGQSSRGKSDREDSSTRMSDQLHRRI
RTARHRNGEYIANDSGTLTRRVSNHHVKKLSWLMLSEPEEGYRYIPQLGDEVVYLRQGHQ
EYIKSYSLSESGPWRSFTGLGASEICKVEELEYAELPGSGDSCCKLKLRFLDPSSCVHGK
SFKLTLPELINFTDFVIEKTWYDTAMKRNWSSRDKCMVWWRNEDGKGGSWWDGRIIQVQA
KSDDFPESPWERYRVQYKTDPTENHLHSPWELYDSEMLWEHPHIDHEIRDKLLSYFTKLD
RRERFDIQALNQVAEKLEFANRFPAPFYPELIQSRLKNDYYRSVEGVNHDIMIMLSNAEE
YFKITKNVQLVGKIRRISEWFRRKLERI
NT seq 5127 nt   +upstreamnt  +downstreamnt
atggattcgaggaagggcaaagcttctgtttctgcatcttcactgagtgctgcacctttg
agtgtttcaaataaggtggatcagatggtgtcgccccctagggatgtgagagctgttgag
actgatgtggatatagaccttagggaaatttactttttaatcatgcactttttgtctgtc
gggccatgccataggacttttctaaatttcaaggaggaacttttagagcatcagcttcta
cctagaagatatcatgcttggttttcaagaagtggtgaacccagtggggatgatgcggat
gaagatgatgatggcatctctttacctttagattacagcaatctagtgggcaggtatcct
cacataactaaggatcatttggtgaagcttctgaagcaattgatgctgagtacggtcaat
cctttgcatggaaaacttgaaggaagtagtcctaatgcagctgatgttcctactttactt
ggatatggttcattttcgcttcttaatgttgatagaaaaacagctgacaaactggtgaag
ccccctccactttacatgcgttggccacatatgaaggctaatcaggttcaggggctaagt
ttaagggagattggaggtggttttactaagcaccatcgttctccatccattcgcagtgca
tgttatgcaatcgccaaaccatctactatggtgcaaaagatgcaaaatattaaaaagcta
agggggcaccgtgtggctgtctattgtgccatatttgatggatccgggagatatgttatt
agtggttcagatgatcgtcttgtcaagatttggtctatggaaactgcattttgcttagct
agttgccgtggacatgaaggtgatattactgatttggctgtaagctcaaacaatgctttg
gtggcatctgcttcaaatgattttgtcattcgagtttggcgcttaccagatgggatgccg
atatcagttttgcggggacatactggagcagttaatactattacatttagtcccagtgtc
atataccagctactatcgtcatcagatgatggaacttgtagaatatgggatgcgagaaat
tcacacaatccacgaatatatgtacctcgacctccagatgctataaatgggaagggcaat
gctccaccagctagtttgccatcctcaagtaatgttcaacaaagctatcaagtactttgt
tgtgcatataatgcaaatggaactgtttttgttactggtagctctgatacttatgccagg
gtgtggagtgctttgaagcccaacactgatgacgcagaacaaccaatacacgagatggat
ttattatctggccacgagaatgatgttaattatgtgcagtttagcggttgctctgtggct
tcaaaaattttgacatctgacccctggaaagaagaaaatactttgaagttccgaaatttc
tggtattgtcatgataacatagttacctgctctcgtgatggtagtgcaattatatgggtt
cccagatcacgtaaatctcatggaaaagtaggacgctggactcgtgcatatcatttaaaa
gtgccaccaccgcctctgcctccccaacctccacgaggtggtccaaggcagagatttcta
cctacacctcgtggtgtcaatatgattatatggagcctggacaatcgctttgtgcttgca
gctattatggattgcagaatatgtgtttggaatgcagttgatggcagcttagtgcactct
ttgactggtcatactgaatcttcttatgttttggatgttcaccctttcaaccctcgaata
gctatgagtgctgggtatgacggacgaaccattgtgtgggatatatgggagggcatacct
attcggacatatgaaattggacgttttaagttggttgatgggaagttttctccggacgga
acatcaattgtgctttcagatgatgttggccaaatatattttctgaacacaggtcaaggc
gagtcccagaaagatgcaaaatatgatcagttttttcttggtgattatcgaccccttatt
caggatactcagggatatgttcttgatcaggttgagactcaacttccaccacaccgaaga
aacattcaggaacctctatgtgattctagtatgctgccatatccagaaccttatcagagt
caatttcagcaacgtcgacttggtgctcttggcattgaatggcgtccttcattgataaaa
tatgctgttggtccagattttactgttggtcaggactacccagtggtacctttggtagat
ttggaagtaatggttgagccacaaccagagttcttagatgccatgttctgggagccagaa
tatgacattattgtaagcgatgatgctgactctgaatacaatgcaaatgaggatagttct
agtgcagccgggcaagggagtgttatctcttctagtgatctagaatatagtgatgactct
agtaatagggacggccttcgaagatcaagaaggaaaaaacataatgttggagttgaggta
atgacttcctctggaaggcgtgtaaggaaaaggaatttggatgagtgtaatggtaatact
tctggaagtaacagactccgcaagaaatccaagggcagctcaaaagcctcaaaaaggaaa
tcttccatagctaagacattgagaccccagcgaattgctgcacataatgctcgtagtatg
ttctctcaaattgatgaaacatctactgatggggaagataatgattctgatgaagaagca
tcagacagtttccaagatcctgatgatcttagtgaatctgagagggaaatggataataaa
catcttgaaattaaaaagccccttttagaaaagtttgcaactgtgtccaagcctcctgca
ttctctgagtccctggtaaatgttgaaactagaccgagactggttgttaagttttcactt
cgtgattctaagaagaatgtgcccactgaggacacaagactagcttgtgagactcaggat
aatatggtatcccagtcttctagacctcaacctgaagaaagtgatcaaaaaacttttcca
gacacaaaatcgttggaccctgcattatcttctatggttgcaactaatgctgaacttccc
caaagcctcaacggaaatgaaaatgatgataaagaacaaactgaaaatgctacaaataat
ctgtatgcattcagatatgttgaggcaaacacagatcagtgcagaaagatgaagacacac
acacatgaactttcaagatcaggggatgctttgctgactgatgctgaaattgatgacctt
cttgaacacaatgctaatgggagatcagaacatgtgattggcaagttagagactgtcggg
agtatggttaatacagagctgactgattttgaagatgcacctaaattttcatcgcttgaa
ccttcattgtttggcaatcctcagccaaatgctgatggctccttgacatctggttatgat
aagttcaatgaaggtgataaaggccagtctggatctgacaaatgtgcagaggacacacta
gaaaacaatgaagttgttcactcaagccattgccatgacctcaaaatgaaagcacctgtg
aaatcaaccaagttagttattaaaaagaaacaaatttcagcagacactgaaggtccttgc
aaactgaaaattgttagttctaaggcagattcaagctgtgctagaggtattgggatatct
gaaaattcctcctctatggggcctaatctagtcacagaagtaccagaaggtgaagatgac
agaaaatttagttctccacagctactgcattcatattctgacaagagaagttatgatcac
ttccataaaagggacaagtcatataaagggaaagtcaatcaagatggttttgaatctttt
gattgtgatatgggagaacatacttctgttttcagcaaccaacatggtttaggaattggt
ttgtctgatgttacaagtgatcctatgcgtcaaacacggtttataaggatgaagacaact
tctgaggagccaagcacttcaaacagaagaattaaaattcgacagggtcaaagttccagg
ggaaaatctgatcgggaagactcttctaccagaatgtcagatcaacttcatcgaagaata
aggacagccagacacaggaatggtgaatatattgccaatgattctggtactttaactcga
agggtgtcaaatcaccatgtcaaaaaattgtcatggctgatgttgtcagagcctgaagag
ggttaccgatatattcctcaacttggtgatgaagttgtgtacttaagacagggccatcaa
gagtacataaagtcatattcattatctgaatcaggtccatggagatcatttacagggcta
ggtgcttctgaaatttgcaaggttgaagaacttgagtatgcagagctaccaggctctggg
gatagctgttgtaaacttaaacttagatttctagatccttcttcgtgtgtgcatggcaaa
tcgtttaaattaactctacctgaattgattaacttcactgattttgttattgagaaaaca
tggtatgatactgccatgaagagaaattggtcttcaagagataaatgcatggtctggtgg
agaaatgaagatgggaaaggtggaagttggtgggatggtcgaattattcaagtgcaggcc
aaatctgatgacttcccagagagtccttgggaaaggtatcgggtccagtacaagactgat
cccaccgagaatcatctgcatagtccgtgggaactatatgattctgagatgctatgggag
catccccacattgatcatgagatcagagataagctgctttcctatttcaccaaattagac
cgcagggagaggtttgatatccaagcactgaaccaagtagctgagaaattagagtttgca
aacaggtttcctgccccattctatcctgaactaattcaatcaaggttgaagaatgactac
tatcggagtgtggaaggtgtcaaccatgatataatgataatgttatcaaatgcggaagaa
tattttaaaattacaaagaatgttcagctggtgggcaagatcaggagaatatcagaatgg
tttagaaggaaacttgaaaggatatag

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