Glycine max (soybean): 100796580
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Entry
100796580 CDS
T01710
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100796580
Transcription machinery [BR:
gmx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
100796580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
HTH_11
SCA7
GerE
Motif
Other DBs
NCBI-GeneID:
100796580
NCBI-ProteinID:
XP_003541542
UniProt:
K7LXZ2
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All DBs
Position
13:12224686..12231085
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AA seq
512 aa
AA seq
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MGVITVSTSAARTPLRLNTRLISHQQVHKRPIILAFKGNKSNKTTLVSPQEKIPLPLETA
KKHQKRVGKTSESLKRVRAVSTVETSPCTLDVDYNEAAAKLENIYKLSPVSDTCNVEDID
SKIERVLRRRKKVSEERDDGNCDNVVRNQNKKAKRLSLDKRIALKNNAKEEVIDQTQKKR
NVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQAKED
LKEVDKEITGGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQDFASG
PRFQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERV
RVDIQRTKLKLTFELQRSPTEEELVERIGISLERYHEVMKASKPILSLHSRHITTQEEYI
NGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNL
NISREIVRKHEVKALMKLKHPARLDYLRRYVV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgggagttattactgtttctacctcagctgctaggactccattaagattgaatacaagg
ttgatcagtcatcagcaggtgcataaacgacccataattttagcttttaaaggaaataaa
tcgaataaaaccactttggtttcacctcaggagaaaattcctctacccctagaaacagcg
aagaaacaccagaaaagagtaggaaagactagtgagtcactgaagagagtgagagccgtc
tctactgttgaaacctctccatgcaccttggatgtggactacaatgaagctgcagccaaa
cttgaaaatatatataaactcagccctgtatctgatacctgtaatgtggaagatatagat
agtaaaatcgagagagtcttgcggaggaggaagaaggttagtgaggaacgtgatgatgga
aattgtgataatgtggttagaaaccagaataagaaggccaaacgattgagtcttgataag
aggattgcattgaaaaataatgcaaaggaggaggtgattgatcaaactcagaagaaaagg
aatgttaagaatagagtacaaaatattgatgtgcttatcagggattattcagcatcaact
gatttagttagcatggactggaagaaaatgaagattccgccagttcttccttcttcagaa
catgcatggttgttcaagttgatgcagccaatgaaggcactcctacaagcaaaagaagat
ttaaaggaagtggataaagaaattacaggtggtgaactagctgatgcaacaaacatgagt
attattcaagtaaggaaagctatagaggttggtcgagctgcgagaaacaaactcataaag
cacaatctccggcttgtattgttcgtgatcaacaaatattttcaagattttgcaagtggc
ccgaggtttcaagatctttgtcaggcaggagttaagggacttatcacagcaattgatcgt
tttgagccaaaaagaagacttcagctatctacatacagtttattttggataagacattct
atcgttcgttccataaccctctcaagcttcacacgtgttccttttggacttgaaagggtt
agagtagatatccaaagaacaaaacttaagttaacatttgagctccagaggtcaccaacg
gaagaagagttagtagaaagaattgggatctcacttgaaagatatcatgaagtaatgaag
gcatcaaaacccattttatcccttcattcaagacatataaccacgcaagaggagtatatt
aatgggattactgatgttgatggtgttaatggtgataataggaggcaacttgctgttcta
agacttgctcttgatgatgtgcttgattccctgaagccaaaggagagcctagtgatcagg
cagagatatggacttgatggcaagggtgacagaacattgggagaaattgctgggaacttg
aatatttctagggaaattgtccggaagcatgaagtcaaagctctcatgaagcttaagcat
ccagctcggttggattatcttcgtcgttatgttgtataa
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