Glycine max (soybean): 100797601
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Entry
100797601 CDS
T01710
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00040
Pentose and glucuronate interconversions
gmx01100
Metabolic pathways
Module
gmx_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100797601
Enzymes [BR:
gmx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
100797601
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
100797601
NCBI-ProteinID:
XP_014626996
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Position
19:complement(40629984..40633248)
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AA seq
463 aa
AA seq
DB search
MALLKHLLLSFTMIIISFVACYSTLQEDPPSSIYVDHSPSIDDGGTVKNLIEQSTNVLSL
NRFDKRNSLKKVSVNDYGAKGNGDTDDTEAFKKAWDVVCSSGEAILVVPQANYLLKPIRF
SGPCEPNVEVQISGTLDASDDPSDYEDDSKHWLVFDNIKKLFVYGGGTIDGNGNIWWKNS
CKRNKKRPCKDAPTALTFYNCEDLTVENLRIENAQQIHVSFQDSVNVQVSGLNVTAPEDS
PNTDGIHVTNTQNIQISSSVIGTGDDCISIVHGSKDVEATDITCGPGHGISIGSLGAGKS
KEFVSGIRVNRAKIFGTKNGVRIKTWQGGSGSASDIQFQNIEMDNVTNPIIINQNYCDKK
KKPCKKLLSKKSAIQIKNVLYQNITGTSASDIAVRFDCSDKFPCQEIVLQNIDLQCEGGD
DADAMCNNVELSYLGHVRPRCNSKKRKAFTTITSILKYFSWYI
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggccctcctcaaacacctcctcctctcattcaccatgatcatcatttcttttgttgct
tgttatagcactttgcaagaggacccacctagtagtatatatgttgatcattcaccttct
attgacgatggtgggacagtcaagaacttgatcgagcaaagcacaaatgttttgagctta
aacaggtttgacaagcgtaattcgcttaaaaaggttagtgtcaatgattatggagctaag
gggaatggtgatactgatgacacagaggctttcaagaaggcttgggatgtagtatgttct
tctggggaagcaattcttgtggtgcctcaggcgaattatttgctcaaaccaatcagattc
tctggcccttgcgaacctaacgttgaagtccagatttctggaacccttgatgcatcagat
gatccatcagattacgaagatgacagcaaacactggcttgtatttgacaatattaagaaa
ctatttgtttatggtggtggaaccattgatggaaacggcaacatatggtggaaaaactca
tgcaaaaggaacaaaaagcgtccctgcaaggatgccccaacggctctgactttctataat
tgcgaggacttaacagttgagaatttgagaatagaaaatgctcaacaaatccacgtttca
tttcaggactccgtgaatgttcaggtttctggccttaacgtgaccgcaccagaggatagc
cccaacactgatgggattcatgtcaccaatacgcaaaatattcaaatctcaagctctgtg
ataggaactggtgatgattgtatatctattgtacatggatctaaagatgtagaagccaca
gatattacctgtggaccgggccatggtatcagtattggaagcttaggggccggaaaatcc
aaggaatttgtttcaggaatacgagtgaatagagccaagatttttggaactaaaaatgga
gttagaattaagacatggcagggaggttcaggaagtgctagcgacatccagtttcagaac
attgaaatggacaatgtgaccaaccccataataataaatcagaattactgcgacaagaaa
aagaagccatgcaaaaaactgctctcgaagaaatccgcgatccaaatcaagaatgtgttg
taccagaacataacgggcacaagtgcttctgatatagctgtgaggtttgattgcagcgat
aaatttccatgccaggagatagtgttgcagaacatagacctccaatgtgaaggaggagat
gatgccgatgctatgtgtaacaatgttgaattgtcttacttaggacacgttaggcctcgt
tgcaactcaaaaaagagaaaggcatttactactattacctccatattgaaatacttctca
tggtacatatga
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