Glycine max (soybean): 100797745
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Entry
100797745 CDS
T01710
Name
(RefSeq) rRNA biogenesis protein RRP5 isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gmx03009
]
100797745
Ribosome biogenesis [BR:
gmx03009
]
Eukaryotic type
90S particles
Other 90S particles
100797745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
OB_RRP5
Spt6_S1
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
NRDE-2
UTP6_C
Motif
Other DBs
NCBI-GeneID:
100797745
NCBI-ProteinID:
XP_006587175
UniProt:
K7LD07
LinkDB
All DBs
Position
9:complement(19001677..19027260)
Genome browser
AA seq
1911 aa
AA seq
DB search
MAPHSKKPQKKNDSVDKPKIDKASKKIFKPKKREQNIAVAAAKSEALSLPLEDEVPDFPR
GGEFSAKGRNDYDEFGAEDPSKKTRKKKKGKNASGKSNEAADDWGSLSGNGITGKLPRRV
NKITLRNITPGMKLWGVVAEVNEKDLVVSLPGGLRGLVHASDAVDPIFDDKIEVGEIFLS
GVFCVGQLVSCVVLRLDDDKKEKGSRKIWLSLRLSLLHKNYNLDVVQEGMVLAAYVKSIE
DHGYILHFGLPFFMGFLPKNSSAEGWGGEVKIGKLLQGLVRSIDKVRKVVYLSSDPDTIT
KSVTKDLRGLSIDLLVPGMLVNACVKSILENGVMLSFLTYFTGTVDLFHLQNIYPGKNWK
DKCSESQKVVSRILFIDPSSRAVGLTLNPHLVQNRAPPSHVKIGDIYDNSKVVRVDRGLG
LLLEVPSIPEPTPAFVSISDIAEEIPKLEKKYKEGNHVRVRILGLRYLEGIATGVLKASA
LEEEVFTHSDVKPGMVVKAKILSVDSFGAIVQIPGGVKALCPLRHMSELEISKPGKKFKV
GAELVFRVLGCKSKRVTVTHKKTLVKSKLGIISSYADATDGLITHGWITKIEVHGCFVRF
YNGVQGFAPRSELGLEPGADPGTVYNVGQAVKCRVISCIPASRRINLSFIIKPTSVSEDD
MVTLGSLVSGAVDRITSNAVVVYVNASGFSRGTISMEHLADHHGQAILMHSVLKPGYNFD
QLLVLDVKGNNLILSAKSSLIKHAQQIPADINQIHPNSVVHGYICNLIESGCFVRFLGHL
TGFAPRNKAADDQKSNILEAYYIGQSVRSNISNVSSETGRVTLSLKQTACSSTDASFIQD
YFLMDDKIARLEYCGSGASDTKWDEGFNIGMVAKGKVKAVEDVGLVISFEHYNDVFGFIA
NYQLAGTILESGSIVEALVLDVGKADKLVELTLKPEFINRSKESSISRTNKKKRRREASK
DLVLHQTVNAVVEIVKENYLVLSIPENDYTIGYASVSDYNAQRFPHKQYQNGQSVVATVM
ALPSPETSGRLLLLVDVVNETSSSSKRTKKKSSYKVGTLVEAEITDIKTLELKLKFGFGL
YGRIHITEVYYGNVLENPFSSYKVGQTVTARIVAKPNESDGNRKGSQWELSVRPEMVTGS
SDIDDVSENLEFKIGQCVAGYVYKVESEWVWLTISRNVRAQLYILDSATEPSELEDFQNR
YHVGQPVSGHILSVNMEKKLLRLVVRPFSTLSCGTSEEPLTNVVDKDLTAYVHEGDILGG
RVSKILPGVGGLLVQVGPRTYGKVHFTELADTWVPDPLSGYHEEQFVKCIVLEVSHTVKG
TIHVDLSLGSSNVKLSQDSAVNANSKCVEKIEDLHPDMIVKGYIKNVTSKGCFIMLSRKI
DAKILLSNLSEQYVQEPEKEFPVGKLVIGRVTSVEPLSNRVEVTLKMSTAPNIPKSEIID
LSKFHVGDVVSGRIKRVESFGLFIAIDNTNMVGLCHISEISDNRIENIEANYRAGERVKA
RILKVDEERHRISLGMKNSYMRGETVLQIPSKEESDEPIVDGMKSITSMNSSLFGTSNID
VEDEINQFPILSQAQERADIPPLDVALDDFDQFDANNANSQSEEHANEEDIVNEKHKRRE
KKKAKEEREKQIRAAEERLLEDDVPRTADEFERLIRSSPNSSFTWIKYMDFMVSMADVEK
ARSIAERALRTINIREENEKLNIWKAYFNLENKYGNPREEAVMKVFQRALQYNDPKKVYL
ALLGMYERTEQHNLADELLNKMTKKFKHSCKVWLRRIQSLLKQNKDGIQPVIDRASLSLP
KHKHIKFFSQTAILEFKVGFPDRGRSMFEKILREYPKRTDLWSVYLDQEIQHKDEDIIHA
LFERAVSLSLPPKKMKFLFKKYLDYEMSQGDQERIESVKRKAIEYVESLNN
NT seq
5736 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgcattcaaaaaaaccgcagaagaagaacgactctgtagacaaaccgaaaatc
gataaagcctctaagaaaatattcaaaccgaaaaagagggaacaaaacatcgccgtcgcc
gccgcaaagtccgaagcactctctctgccactagaagacgaggttcccgatttccctcga
ggcggagaattttccgcgaagggtaggaatgattatgatgagtttggcgccgaggatccc
tccaagaagacgaggaagaagaagaaggggaagaatgcgtcgggtaagagtaatgaagcc
gcagatgactggggctcgctttccggcaacggtatcaccggaaagttgccgcggcgtgtg
aataaaattactctcaggaatataactcctggaatgaagctttggggtgttgttgctgaa
gtaaatgagaaagaccttgtagttagtttaccagggggtttacgtggtttagttcacgct
tcagatgcggtagatcctatttttgacgacaaaattgaggttggggaaattttcctttct
ggtgtattttgtgttgggcagctggtttcttgtgttgtactgagattggatgatgacaag
aaagagaaaggaagcaggaaaatttggctttctttgcgtctttctttgttgcacaagaac
tacaacttggatgttgttcaggaaggcatggtccttgctgcatatgtgaagagtattgaa
gatcatggttacattcttcattttggtttaccttttttcatggggttcttaccaaaaaac
agctctgctgaaggctggggtggtgaagtaaaaattgggaaacttctgcagggtttggtt
agaagcattgataaagttcgtaaagtggtttacttgagttctgaccctgatacaataacc
aaaagtgtgaccaaggacctcagaggtttatcaattgatcttctagttccaggaatgctg
gtaaatgcctgtgtgaagtcaatccttgagaatggtgttatgttatcatttctcacatac
ttcacaggaactgttgatctgtttcatttgcaaaatatttatcctggaaaaaattggaag
gataagtgcagtgaatctcagaaggttgtttctcggatattattcattgatccatcaagt
agagctgttggtttgacactgaatccacatcttgttcagaacagggcccctccttctcat
gttaaaattggagatatatatgacaactcaaaagttgttagggtggatagaggattagga
ctattgcttgaagttccatcaattccggagccaactccagcttttgtcagcatatctgat
attgctgaggagatcccaaaacttgagaagaagtacaaagaaggaaatcatgttcgagtt
cggattcttgggttaagatatttggaaggaattgctacaggagttttgaaggctagtgct
ttagaagaggaagtgtttactcattctgatgtcaagcctggcatggtggtgaaggctaag
attctttcagttgacagctttggcgctatagtgcaaattccaggtggtgtgaaggcactt
tgtcctcttcgacatatgtctgaattggaaatttcaaagcctggaaaaaaatttaaggtg
ggagctgaattggttttccgtgtgcttggttgcaagtcaaaacgagtgacagttacacac
aagaaaacccttgttaaatcaaaacttgggattattagttcatatgctgatgcaaccgat
ggtttgataacccatggatggataacaaagattgaagttcatggatgctttgtacggttt
tacaatggggtccaaggatttgctcccagatctgaacttggattagagccaggtgctgat
ccaggtacagtgtacaatgttggacaagctgtcaaatgccgggtcataagttgcattcct
gcttcacggaggatcaaccttagtttcataataaagcccacaagtgtttctgaagatgat
atggttacgttgggtagccttgtttcaggagctgttgacagaataacatctaatgctgtt
gttgtttatgtcaatgcaagtggtttctcaaggggtacaatatccatggagcacttggca
gatcatcatgggcaagctattttgatgcactcagtattgaaacctggatataattttgat
caactgctggttctagatgttaagggaaacaatttgatcctgtctgccaaaagttctctt
attaaacatgctcagcagattcctgcagatatcaatcagatacatcctaactctgttgtg
catggctatatatgtaacttaattgagtctggctgctttgttcgtttccttggtcattta
accggctttgctcctagaaataaggctgcagatgaccagaaaagcaatattttggaagct
tattacattgggcaatcagttcgcagcaacatatccaatgttagtagtgaaactggtaga
gtaacactctctctaaagcagacagcttgttcttcaactgatgcatcatttattcaggac
tactttctcatggatgacaagattgcaaggttggaatactgtggctctggtgcatctgat
acaaagtgggatgaaggatttaacattggtatggttgcaaaaggcaaagttaaggctgtt
gaggatgttggacttgttataagctttgaacattataatgatgtttttggttttattgcc
aattatcagttggctggaactattttggagagtggctctatagtggaagcattggttctt
gatgttggaaaggcagacaagcttgttgagttaactctaaaaccagagttcattaataga
tctaaagaaagttccataagtcgtaccaacaagaagaaacgtcgaagggaggcatcaaag
gacttggtattacatcagactgtgaatgcagtagtggaaattgtaaaagaaaattacctg
gttctatcaattccagaaaatgattacactataggatatgcatcagtatcagactataat
gctcaaaggtttcctcataaacaataccaaaatgggcagagtgttgttgcaactgttatg
gctcttccaagtcctgaaacatcaggaaggttgctcttacttgtcgatgtggtcaatgag
acatcatctagttctaaaagaaccaagaagaagtctagctacaaagtgggaactctggtt
gaggcagagattactgacatcaaaacgcttgaactgaagctgaagtttggatttggtcta
tatggccggattcacataacagaggtatattatggaaatgttttggaaaatccattctct
agctacaaagttgggcaaacagtgacagcaaggattgttgcaaaacctaatgagtcagat
ggcaatcggaagggctctcagtgggagctatcagtcagacctgaaatggttacaggttcc
agtgatatagatgatgtatctgaaaatcttgagtttaaaattgggcaatgcgtggctggt
tatgtatataaagtagaaagtgaatgggtctggttaacaatatcgcgaaatgtaagggct
cagctatatattcttgatagtgctactgaacccagtgagcttgaggatttccagaatcga
tatcatgttggacaacctgtttctggtcatattctaagtgtcaacatggagaagaagcta
ttgcggttggttgtgcgccccttttctactctttcttgcggaactagtgaagagccacta
actaatgttgtggataaggatttaacagcatatgttcatgaaggagatattttaggtgga
agggttagtaaaatacttccaggtgttggtggattgcttgtccaagttggtcctcgcaca
tatggaaaagtacattttactgaacttgcagacacatgggtgcctgatccgttgtctgga
tatcatgaagagcagtttgtcaaatgtatagtgcttgaagtcagtcacactgtcaagggt
actattcatgttgacttgtcattgggatcttccaatgtgaagctttcccaggattctgct
gtgaatgctaacagcaaatgtgtggagaagattgaggatcttcatcctgatatgattgta
aagggttatattaagaatgtcacatcaaaaggttgcttcattatgctctcacgaaagatt
gatgccaaaattcttctgtccaatctttccgaacaatatgttcaagaacctgagaaagaa
tttcctgttggaaaacttgtaattggcagggttacatctgtggagcctctttcaaatcgt
gttgaagttacactgaagatgtcaacggctcccaatatacccaaatctgagattattgat
ttgagtaaatttcatgttggagatgttgtatctggcaggattaagcgggttgagtcattt
ggtttattcattgcaattgacaacacaaacatggttgggttatgccatatatcagaaatt
tctgataaccgtattgagaacattgaagcaaactatagagctggagagagagtaaaggca
agaatattaaaggtggatgaagaaagacacagaatttctttgggaatgaagaattcatat
atgaggggtgaaaccgtgcttcaaataccatccaaggaagaatcagatgaacctattgtg
gatggaatgaagtctataacttctatgaatagtagtttgtttggaacctcaaatattgat
gttgaggatgaaattaatcaattcccaattctttcacaagcacaagaaagggcagacatt
ccaccacttgatgttgcccttgatgactttgatcaatttgatgcaaataatgctaacagt
caaagtgaagaacatgcaaatgaagaagacattgtaaatgaaaaacataagagacgtgaa
aagaagaaagcaaaggaggagagggagaagcaaataagggctgctgaggaaagattactg
gaggacgatgtccctagaactgctgatgagtttgaaaggctgattagaagctctcctaat
agcagtttcacctggataaaatatatggatttcatggtttctatggctgatgttgagaaa
gcccgctcaattgctgaaagggctttgaggacaataaatatccgagaagagaacgagaag
cttaacatctggaaggcatactttaatttggaaaataagtatggaaaccctagagaggag
gctgttatgaaagtattccaaagagctctacaatacaatgatcccaaaaaggtttaccta
gcactcttgggaatgtatgagaggaccgagcagcataatttagccgatgaacttctcaat
aaaatgacaaagaagttcaagcattcatgcaaagtttggttgaggcgtatacaaagtctt
ttgaagcaaaacaaggatggaatccaaccggtcattgatcgagcttcattaagccttcct
aaacacaagcatattaaatttttctctcagacagcgattcttgaattcaaggttgggttt
ccagatcgagggcgatccatgtttgaaaaaatcctacgggagtacccaaagagaacagac
ttatggagtgtttatcttgatcaagaaattcaacataaagacgaagatatcattcatgca
ctgtttgaaagggctgttagtctgagcctcccacctaaaaagatgaagttcttattcaaa
aagtatcttgattatgagatgtcccaaggtgatcaagaacggattgaatctgtgaagagg
aaagcaatagaatatgtcgagagtctaaacaattga
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