Glycine max (soybean): 100797840
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Entry
100797840 CDS
T01710
Name
(RefSeq) F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
gmx
Glycine max (soybean)
Pathway
gmx04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100797840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmx04121
]
100797840
Ubiquitin system [BR:
gmx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100797840
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GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
LRR_At5g56370
LRR_Zer-1
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
100797840
NCBI-ProteinID:
XP_003526665
UniProt:
I1KAH6
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Position
6:9791137..9794803
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AA seq
372 aa
AA seq
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MVGKDNLRAEDLNLCFKKLMMVAGSGNSEKGVNLKVGVITEWKDIPVELLMQILSLVDDQ
TVIIASGVCRGWRDAIYFGLARLSLSWCSKNMNNLVLSLVPKFAKLQTLILRQDKPQLED
NAVETIAKCCHELQILDLSKSFKLTDRSLYELALGCRDLTKLNISGCSAFSDNALAYLAS
FCRKLKVLNLCGCVRAASDTALQAIGQYCNQLQSLNLGWCDNVGDVGVTTLAYGCPDLRI
VDLCGCVRITDDSVIALATRCPHLRSLGLYYCKNITDRAMYSLAHSKVNNRMWGTVKGGG
NDEDGLRTLNISQCTALTPSAVQAVCDSFPSLHTCSGRHSLIMSGCLNLTSVHCACAVHA
HRAFTTFPYPAH
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggttggcaaggataatctgagggctgaggacttgaacttgtgctttaagaagcttatg
atggtggccgggagtgggaacagtgagaaaggggtgaacttgaaggttggggtgatcacc
gagtggaaggatattcctgtggagcttctgatgcaaattctgtcccttgtggatgatcag
acggtgatcatagcttctggagtttgtcgtggatggagagatgctatttactttggcctt
gctcgtttatcactctcatggtgtagcaagaacatgaataacttggtcctatctcttgtt
cctaaattcgcaaaactgcaaactctaatcctccgtcaagacaagcctcaactagaggat
aatgctgttgagactattgcaaaatgctgtcatgaactgcagatcctggacctcagcaaa
agtttcaagctaactgatcgttcactctatgagctcgcccttggttgtcgcgatcttaca
aaactcaacatcagcgggtgttcagcatttagtgacaatgctctggcttaccttgccagc
ttctgcagaaaactgaaagttctaaatctttgtggatgtgttagagctgcatccgatact
gcattacaggctattggacaatactgcaatcagctacaatctttgaaccttggatggtgt
gataatgttggcgatgttggagtgactactttagcatatgggtgtcctgatcttaggata
gttgacttgtgtggctgtgtccgtataacagatgacagtgtgattgctttggcgactaga
tgcccccatctgaggtccctaggactgtactactgcaagaacatcacagatagagcaatg
tattccttggcacacagcaaggtgaacaacaggatgtggggaactgtgaaaggaggagga
aatgatgaagatggtttaaggactttgaacattagccaatgcactgcactcaccccatct
gctgttcaagctgtttgtgactcattcccttctctccacacatgctcagggaggcactca
ctcatcatgagtggctgcctcaacttgacatcagtgcattgtgcctgtgctgtccatgcg
caccgtgcattcaccactttcccttatcctgcccattaa
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