Glycine max (soybean): 100798275
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Entry
100798275 CDS
T01710
Name
(RefSeq) prolycopene isomerase, chloroplastic isoform X1
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00906
Carotenoid biosynthesis
gmx01100
Metabolic pathways
gmx01110
Biosynthesis of secondary metabolites
Module
gmx_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
100798275
Enzymes [BR:
gmx01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
100798275
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
GIDA
FAD_oxidored
HI0933_like
GDI
Thi4
FAD_binding_3
Pyr_redox_2
GMC_oxred_N
Motif
Other DBs
NCBI-GeneID:
100798275
NCBI-ProteinID:
XP_003519091
UniProt:
A0A0R0L3G5
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Position
2:36839142..36849146
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AA seq
608 aa
AA seq
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MLNSSFLSLSEHTFSHTPHHFPTRSASQNPNLHPKFQSLAFGNRGGSEFPSGSCSNTPRR
KGVLVVRSKSTLGVEEVVVKGGGVKGKGEEFDAIVIGSGIGGLVAGTQLAVKGARVLVLE
KYVIPGGSSGFYQRDGYTFDVGSSVMFGFSDKGNLNLITQALEAVGCRMQVVPDPTTVHF
HLPNNLSVRVHKEYDKFIEELTSYFPHEKEGILKFYGECWKIFNALNSLELKSLEEPLYL
FGQFFRRPLECLTLAYYLPQNAGAIARKYIQDPQLLSFIDAECFIVSTVNALQTPMINAA
MVLCDRHFGGINYPLGGVGGIAKSLAKGLVDQGSEIVYKANVTSIIIEQGKAVGVRLSNG
REFFAKTIISNATRWDTFGKLLKGVPLPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPDT
DCHHFVLESNWSKLEEPYGSIFLSIPTVLDSSLAPEGRHILHIFTTSSMEDWEGLSRVEY
EAKKQLVADEITSRLENKLFPGLRSSIDFMEVGTPKTHRRYLARDEGTYGPMPRRIPKGL
LGMPFNTTGIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSPVLDSMLLRL
LGWLRTMA
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgctcaattcctctttcctctccctttctgaacacaccttttcccacacaccccatcat
ttcccaacaaggtctgcttctcaaaaccccaaccttcatccaaagtttcaatctttagcc
tttggaaaccgtggagggagtgaatttccatctgggtcttgctccaatacccccagaaga
aaaggggtgttggttgtgcggtcaaagtcaacgctgggagtagaagaagtggtggtaaag
ggaggaggagtgaagggtaagggtgaagagtttgatgcaattgtgatagggtctgggatt
ggagggttggttgcagggacacagctggcagtgaagggtgccagagttttggttttggag
aagtatgtgattcctggtggaagctctgggttttaccagagagatggctatacttttgat
gtggggtcttctgtcatgtttggtttcagtgataagggtaatctcaatttgataactcaa
gcgttggaagcagttggttgtcggatgcaagtggtgcctgatccaacaaccgttcatttc
catctaccgaataacctttctgttcgagtgcacaaagaatatgataaattcattgaagaa
ctgaccagttactttccccatgaaaaggagggtattcttaaattctacggtgaatgctgg
aagattttcaatgctctgaattcattggaattgaagtcactagaagagccactctacctt
tttggacagttttttcggaggccgcttgaatgcttgaccctagcctattatttgcctcag
aatgctggagccatagctcggaagtacattcaagatccacagttgttgtctttcatagat
gcagagtgttttatagtgagcacagtcaatgctttgcagacaccaatgatcaatgctgcc
atggttctatgtgacagacactttggtgggattaactaccctcttgggggtgttggtggg
atagcaaagtccttagcaaaaggtctcgttgatcagggtagcgagatagtttacaaagca
aatgtcaccagtattataattgagcagggcaaagctgtaggtgtgaggctttcaaatggc
agagagttctttgccaaaactataatatcaaatgctaccagatgggatacatttggaaag
ttactgaagggcgttccacttccgaaagaagaagagaacttccagaaagtttatgttaaa
gctccatcttttctttcaattcacatgggggttaaagctgaggttttgccgccagataca
gactgtcaccattttgtgcttgagagcaactggtccaaattggaggagccatatggaagt
atctttctaagtataccaactgttcttgattcatcattggctcctgaaggccgtcatatc
cttcatatattcacaacttcttccatggaggactgggagggtctctcaagagtagaatat
gaggcaaagaagcagcttgtagcagatgaaatcacaagcagattagagaataaattgttt
cctggtcttagatcatccattgattttatggaggtagggacacctaagacacaccggcga
tacctggctcgtgatgagggaacttatggtccaatgccacgcagaatcccaaaggggtta
ttgggaatgccattcaataccacaggcatagatggtctttactgtgttggcgatagctgc
ttccctggacaaggtgttattgctgtagctttctcaggagttatgtgtgctcatcgagta
gctgcagatattgggctggagaagaagtcacctgtgttggattccatgctgcttcggttg
cttggttggttaaggacaatggcatga
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