Glycine max (soybean): 100798594
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Entry
100798594 CDS
T01710
Name
(RefSeq) HBS1-like protein isoform X2
KO
K14416
elongation factor 1 alpha-like protein
Organism
gmx
Glycine max (soybean)
Pathway
gmx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100798594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100798594
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100798594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Zn_ribbon_RanBP
Mg_chelatase
DZR
Motif
Other DBs
NCBI-GeneID:
100798594
NCBI-ProteinID:
XP_003532775
UniProt:
I1KSJ6
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Position
8:9355199..9362583
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AA seq
714 aa
AA seq
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MPRKVNYGLDYDDDYYDDDYDDYAYDDVDAEDYGGPDTKQETIKPGLWQCSICTYDNDES
MTFCDICGVVRRPLVNTGTSNSNKTDPFKFNVPSPDDVVYTGLRSSKTGLKDKATNSNSQ
LSSSTREKNELSVQSNAESSDNLSSLMQKSRQDSSTESKLSKKVAIDLQTSGKTSNSLPE
SLSKDKDNNINKINSSKNGTIDIQSSKEKSGSLSTRSKVKESDNISSSSIKDGKPESISS
SFSNMVVDVRFGNSDNTNAKGTHSRVSYKPEKWMLPEQAEDTLTQLNLAIVGHVDSGKST
LSGRLLHLLGRISQKEMHKYEKEAKLQGKGSFAYAWALDESSEERERGITMTVAVAYFDT
MRYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASLGSFEAGMDGSKGQTREHAQLIR
SFGVDRVIVAVNKMDAVAYSQDRFDFIRQQLGVFLHFCGFKDSSLSWIPMSAMENQNLVA
SPSDARLKNWYGGPYLLDAIDSLQPPTREFSKPLLMPICDVIKSTTLGQVSASGKLEAGA
LRSGSKVLVMPSAVVGTVRSLERDSNACTVARAGDNVAVTLQGVDGNHVMAGDVLCHPDF
PVAVAKHLELKVLVLDGASPILVGTQLEFHIHHAKEPGRVSRILSVLDPKTGKVTKKSPR
CLSAKQSAVIEVILNETVCVVEFSSCKALGRVSLRSMGRTIAVGVVTRIIEEQG
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtaaagtaaattacggactcgattacgacgacgattactatgatgatgattat
gatgactatgcttatgatgatgttgatgcagaagactatggaggacctgatacaaagcaa
gagaccattaagcctggcctttggcaatgctccatttgcacttatgacaacgatgagagt
atgactttttgtgatatttgtggtgttgtacgccgtcccttggttaatactggaacttcc
aacagtaacaaaacagatcctttcaagttcaatgttccatcccccgacgatgtggtttat
actggcctacgttcttccaaaacgggtttgaaagacaaagctacaaactctaattctcag
ctttcatcaagcaccagagagaagaatgaactttctgtacagtcaaatgctgaaagttca
gacaacttatcatccttaatgcaaaagagcagacaggatagttcaactgagagcaagctt
tccaaaaaagtagcaattgatctgcaaacaagtggtaaaacttcaaacagcttgccggaa
tctttgtcaaaagacaaagataacaatattaataaaataaattcttcgaaaaatggtaca
attgatattcaatcaagcaaagaaaagtcaggtagtttgtctacacggtcaaaagtcaag
gaaagtgataacatcagttcctcttctatcaaagatggaaaacctgaaagtatttccagc
agtttcagcaacatggttgtcgatgtaagatttggaaattctgataacactaatgctaaa
ggaactcactcacgtgtttcttataagccagaaaaatggatgctccctgaacaagctgaa
gatacattgactcagctgaatcttgcaattgttggccatgttgattctggaaaatcaact
ctatctggtaggttactgcacctattgggacggatctcccagaaagaaatgcacaaatat
gaaaaggaggccaagttacagggcaagggatcctttgcttatgcttgggcacttgatgaa
agttctgaagaaagagaacggggaataactatgacagtggctgttgcttattttgacacg
atgagatatcatgttgttgtgctcgattcccctggccataaagattttgtcccaaacatg
atttctggggcaacacaagctgatgctgcaattcttgttatagatgcctcacttggttca
tttgaagctggtatggatggcagcaaagggcaaacaagggagcatgcacaacttatcaga
agctttggtgttgaccgggttatagttgctgtaaataagatggatgctgttgcgtactcc
caagatcgatttgattttataaggcagcagctgggagtttttctccacttttgtggtttc
aaagattcttctctatcttggattcccatgagtgccatggaaaatcaaaatttggtggca
tccccttctgatgctcgtttaaaaaactggtatggtggaccttatctattagatgcaatt
gactctctccaacctcctactagagaattctcaaaacctctactaatgccaatatgtgat
gtcatcaaatcaactacacttggacaggtttctgcctctggtaaactagaagcaggagct
cttcggagtggatcaaaggtcttggttatgccttcagctgttgtgggaacagtacgctca
ttggagcgtgactctaatgcttgtactgttgcaagagctggagataatgtagctgtaacg
ttgcaaggtgtggatggaaatcatgtgatggcaggagatgtactatgccatcctgacttt
cctgttgcagttgctaagcatttggagttgaaagtgctagtgttggatggtgcaagtccc
atattggtgggcacacagttagagtttcacatacaccatgcaaaggaacctggcagagtt
tcaagaatattatcagtacttgatcccaagacgggtaaggtgaccaaaaagtcacctcgc
tgtctctctgcaaagcaaagtgcagtaattgaggtgattttgaatgagacagtctgtgtg
gtagagttctctagttgtaaagctcttggaagggtatccctaagatcaatgggaagaacg
attgctgttggagttgtgacaagaataattgaagaacaaggttaa
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