Glycine max (soybean): 100798663
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Entry
100798663 CDS
T01710
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00900
Terpenoid backbone biosynthesis
gmx01100
Metabolic pathways
gmx01110
Biosynthesis of secondary metabolites
Module
gmx_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
100798663
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gmx01006
]
100798663
Enzymes [BR:
gmx01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
100798663
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
100798663
2.5.1.29 geranylgeranyl diphosphate synthase
100798663
Prenyltransferases [BR:
gmx01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
100798663
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
DUF7114
Motif
Other DBs
NCBI-GeneID:
100798663
NCBI-ProteinID:
XP_003554194
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All DBs
Position
19:41018834..41028606
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AA seq
331 aa
AA seq
DB search
MQGFGKGLKEIRDRFDTIMERAIKEHEEERPNFDFKAYMLDKINTVNRALDAAVALREPR
KLHEAMRYTLLAGGKRIRPVLCLAACSLVGGSEATAIPAACAVEMIHTMSLIHDDLPCMD
NDDLRRGKPTSHKIFGEHVAVLAGDALLALAFEHVAASTEGAYAARVVRAIGELAKCIGA
EGVMAGQVVDVNSEGLTLSMSDEVAVLERLEFIHVHKTAVVEGAVVMGAILGGGSDEEIE
RLRMFGRCIGLLGQVVDDVLDVTKSSEELGKTAKKDLVADKLTYPKVLGIHESKEFAHKL
VHDANKMLAGFHPPKAAPLFALTNYIAYRQN
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggtttgggaaaggactaaaggaaattcgggacaggtttgacaccattatggag
agggcgatcaaggagcatgaagaggaaaggcccaacttcgacttcaaggcctacatgctc
gacaagatcaacaccgttaacagagcattggacgcagccgttgcgctaagagaaccacgg
aagctccacgaagccatgcgctacaccctcctcgccggcggaaagaggatccgcccggtg
ctctgcctcgccgcctgctctctcgtcggcggcagcgaggccaccgcaatccccgccgcg
tgcgccgtcgagatgatccacaccatgtcgctcatccacgacgacctgccctgcatggac
aacgacgacctccgccgtggaaagccgacaagccacaagatcttcggcgaacacgtggcc
gtcctcgccggcgacgcgctcctcgcgctcgcgttcgagcacgtggcggcgtcgacggag
ggcgcgtatgcggcgcgcgtggtgcgcgcgatcggggagttggcgaaatgcatcggcgcg
gaaggcgtcatggcgggacaggtggtggacgtgaattcggaagggttgacgttgtcgatg
tcggatgaagtggcagttttggagaggttggagtttattcacgtgcacaaaacggcggtg
gttgaaggtgcggttgtgatgggggcgatactggggggtgggtcggacgaggaaattgag
aggttaaggatgtttggtaggtgcattgggttgttgggtcaggttgtggatgatgttctg
gatgttactaaatcgtccgaggaattgggaaagacggcgaagaaggacttggtggctgat
aaactcacgtaccccaaggttttggggatacatgagtcgaaggagtttgctcataaattg
gtgcatgatgcaaacaaaatgttggctgggtttcatcctccaaaggctgctcccctattt
gctttaaccaattacattgcttacaggcaaaattaa
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