Glycine max (soybean): 100798684
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Entry
100798684 CDS
T01710
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100798684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100798684
03012 Translation factors [BR:
gmx03012
]
100798684
Enzymes [BR:
gmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100798684
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100798684
Translation factors [BR:
gmx03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100798684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_11
Dicer_dimer
T2SSE
PhoH
NPHP3_N
ResIII
Motif
Other DBs
NCBI-GeneID:
100798684
NCBI-ProteinID:
XP_006606892
LinkDB
All DBs
Position
20:complement(36511093..36529615)
Genome browser
AA seq
1056 aa
AA seq
DB search
MLLRDKSKQELVSREKKDRRDFDRIAVLASRMGLYSHMYAKVVVFSKVPLPNYRYDLDDR
RPQREVSLSITMYTQVNVYFEEYLGQKSRMNKSFSDLSSARSSSNGSIGTDEGLFELPEP
LASSNAYMEKILRQRSLQMRDQQQAWQESPEGRRMLEFRRSLPAYKKKEAILSVISRNQV
VIISGETGCGKTTQIPQFILESEVESVCGAACNIICTQPRRISAMSVSERVASERGEKLG
ESVGYKVRLEGMKGRDTHLLFCTTGILLRRLLADRKLKGVTHVIVDEIHERGMNEDFLLI
ILKELLPHRPELKLILMSATLDAELFSSYFNGAPIMFIPGFTYPVRTHFLENILEMTGYR
LTPYNQIDDYGQERMWKMNKHAPRKRKSQIASAVEDAIMAADFKDYSLQTQESLSCWNPD
CIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLTHTVLGDANRVLLLTCHGS
MASSEQRLIFEEPEDGVRKIVLTTNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLL
PTWISKVSAKQRRGRAGRVQPGECYHLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLR
LGSISEFLSRALQSPETLVVQNAIEYLKIIGALDEDENLTILGRCLTMLPMEPKLGKMLI
LGAIFNCLDPILTVVAGLSVRDPFLTPLDKRDLAEEAKSQFCGAYSDHLALVRAYEGWRD
AEMDLGGYEYCWKNFLSSQSMKAIDALRREFICLVKDIGLVDSNTASCNEWSSDVNLIRA
IICYGLYPGICSVVHNEKSFSLKTMEDGQVLLYSNSVNAQETKIPYPWLVFNEKIKVNSV
FLRDSTAVSDSVVLLFGGSLLKGDTDNHLKMLGGYLEFFMEPSVAEMYQSIRRELDDFIQ
SKLLFPRMATQWCHDLISAVRLLISNDKCEGRFVFGRQVLKPSKKSIVMASHPTLVSRTE
SGPGGDNSKSQLQTLLTRAGYAAPIYMTKQLKNNQFQATVEFNGMQIMGQPCNNKKSAEK
DAAAEALQWLMGGKQTGKEYINHVSMLLKKSKKDHN
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgctcttgagggacaagagtaagcaagagttggtctcgagggagaaaaaggataggcgt
gattttgaccgaatagcagttctagcaagcagaatggggttgtatagccatatgtatgct
aaggttgttgtcttcagcaaggtcccacttccaaattacagatatgatttggatgatcgg
cggcctcagagggaggtgagcttgtctatcaccatgtatacccaagttaatgtttatttt
gaggaatatcttggccaaaaatccaggatgaacaaaagcttttcagatttgtcatctgca
agatcaagcagtaatggcagtattggtactgatgaagggctttttgagctacctgagcca
ttagcatccagtaatgcttatatggagaaaattctacggcagaggagcttacaaatgcgc
gatcagcagcaagcttggcaggaatctcctgaaggaagaagaatgctagaatttcgcaga
agtctccctgcttataaaaagaaagaagcaatattatcagtcatatcaaggaatcaggta
gttatcatttcaggcgaaacaggttgtggcaagacaacacaaattccacaatttatttta
gaatctgaggtagaatcagtttgtggagctgcttgtaatattatatgcacacagccaaga
cgcatttcagccatgtctgtttctgaaagggtggcctctgagagaggggagaaattgggc
gaatctgttggatataaagttcgacttgagggtatgaaagggagagatacccatcttctc
ttttgcaccacaggcattttattaagaagattactagctgatagaaagttaaaaggcgta
actcatgttattgtggatgaaattcatgagcgtgggatgaatgaagattttctgcttatt
atccttaaagaacttcttccacatcgaccagaactgaaactgattttgatgagtgctacc
ctagatgctgagctcttctcttcatactttaatggggccccaattatgtttattccgggc
ttcacataccccgttagaactcactttttggagaacattcttgaaatgacgggctacaga
ttaactccttataatcaaatcgatgattatggtcaagaaaggatgtggaaaatgaacaaa
catgccccaagaaagagaaaaagccaaattgcttctgctgtagaggatgcaattatggca
gctgatttcaaagattacagcctacagacacaggagtctttgtcgtgttggaatcctgac
tgtattggttttagtctcatagaatatattttatgcaatatatgtgagaatgaacggcct
ggtgctgttttggttttcatgactggatgggatgatataagctctctgaaagagaagctc
ctgacacatactgtcttgggagatgcaaaccgtgttttgttgcttacatgtcatggctca
atggctagttcagagcagagattaatatttgaagagcctgaagatggagttagaaaaata
gtgctaacaacaaatattgctgaaacgagtatcacgataaatgatgttgtttttgttctt
gactgcggaaaagcaaaagaaacatcatatgatgcactgaataacacgccttgtttgctt
cctacatggatctctaaggtttctgctaaacaaagaagaggaagagctggtcgggttcaa
ccaggagagtgttaccatctctatcctagatgtgtgtatgatgcttttgcagagtatcag
ttgccagaaattttgagaacacctttgcaatctctctgtttacaaatcaaaagtctaaga
cttggaagtatatcggagttcttgtctagggctttgcagtctcctgagacactcgtggta
caaaatgctattgaatatttaaaaataattggggctttggatgaggatgaaaatctcact
attctagggcgctgcctgacaatgcttcctatggaacccaaacttggcaagatgctaata
ttaggtgctattttcaattgcctggatcccatattaactgtggttgctgggcttagcgtg
agagatccttttctaacaccattggataaaagagatcttgcagaggaagcaaagtctcaa
ttctgtggtgcatacagtgatcaccttgcacttgtaagggcatacgaaggttggagagat
gctgaaatggaccttggaggatatgaatactgctggaaaaattttctttcctcacaatcc
atgaaagctattgacgctcttcggagagagttcatatgcctggtcaaggatattggatta
gttgatagcaacacggccagctgcaatgaatggagctctgatgtaaatcttatccgagca
attatttgctatggtctatatcctggaatttgctctgttgtgcataatgagaaatcattc
tctttgaaaacaatggaggatggtcaagtgctcctatattcgaactcagtgaatgctcag
gaaactaaaattccgtatccatggctagtttttaatgagaagataaaagtgaactcagtt
tttcttcgtgactcaacagctgtgtctgattcagtggtgcttctgtttggtggaagctta
ttgaaaggagatactgataatcacttaaaaatgttgggaggatatctagagtttttcatg
gagcccagtgttgctgaaatgtaccagagtataagaagagaacttgatgacttcattcag
agcaaactactttttccaagaatggccacacagtggtgtcatgatctcatatctgcagta
aggcttctgatttcaaatgacaagtgcgaaggtagatttgtatttggtcgccaggttctt
aaaccatcaaagaaatctattgtgatggcctcacacccaaccttggtttcaaggactgag
agtggacctgggggtgataattctaaaagtcagctccaaaccttgcttacgagagcagga
tatgcagcacccatctacatgactaaacaattgaagaacaatcagtttcaggctaccgtt
gaattcaatggaatgcagataatgggtcaaccttgtaacaataagaagagtgcagaaaaa
gatgctgcagctgaggcactgcaatggctgatgggtggaaagcaaacaggcaaggagtac
atcaatcacgtgtcgatgttacttaagaaaagtaagaaggatcacaattaa
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