Glycine max (soybean): 100799106
Help
Entry
100799106 CDS
T01710
Name
(RefSeq) probable pectate lyase 16
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00040
Pentose and glucuronate interconversions
gmx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100799106
Enzymes [BR:
gmx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
100799106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
100799106
NCBI-ProteinID:
XP_003547262
UniProt:
I1MFJ5
LinkDB
All DBs
Position
15:complement(8640159..8641770)
Genome browser
AA seq
373 aa
AA seq
DB search
MATSPTLLLLSCFILHLAYSTESAVLNKIDSCWRAKSNWASNRQALANCGIGFGKDSIGG
KYGSIYKVTDPSDDPISPKPGTLRYGVIQTQPLWIIFAKDMVIRLDNELIMNSYKTIDGR
GAKVEIANGPCITIQGVSHVIIHGISIHDCKPSKAGLVRSTPSHLGHRRGSDGDGISIFA
SSNIWIDHCFLARCADGLIDVIHASTSITISNNYFTQHDKVMLLGHSDEYTADKKMKVTI
AFNRFASGLIERMPRVRFGYAHVVNNKYDGWKMYAIGGSSNPTILSEGNYYVAPNNPATK
QVTKREMKGKLKNWKWRSSKDAFLNGAYFVPSGYGSCDPNYSPTQYFTAVPASLVPAITL
NAGPLTCVVGKAC
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggccacctctcccacactactcttgctttcatgcttcatactacaccttgcatattca
acagaaagtgcagttctaaacaagatagactcttgctggcgtgccaaatcaaattgggca
tcaaatcgccaagccttggctaattgtggaattggctttggcaaagattcaattggtggc
aagtatggatcaatatataaagtcacagatccctctgatgaccccataagcccaaaacca
ggcacacttcgttatggtgttatccaaacacagcccctttggatcatttttgccaaagat
atggttattaggctcgataatgagcttatcatgaatagctacaagaccattgatggaaga
ggtgctaaagtggagattgcaaatgggccttgcattacaatacaaggtgttagccatgtt
atcatacatggcattagcattcatgattgcaaaccaagcaaggctggccttgtaaggagt
accccatctcatcttggccatcgtcgaggctctgatggggatggcattagcatatttgcc
tcctcaaatatttggattgatcattgctttttggctcgttgtgctgatggcttgattgat
gttattcatgcctcaacttccattaccatttctaacaattactttacccaacatgacaaa
gttatgctactaggacacagcgacgaatacacagcagataaaaaaatgaaagtaacaata
gccttcaaccgatttgctagtggtctgattgaaaggatgccaagggtaagatttggttat
gcacatgtggtgaacaacaaatatgatgggtggaagatgtatgccataggtggcagttct
aacccaaccattttaagtgaaggaaactactatgtcgctccgaataaccctgccacaaaa
caggttaccaagagggaaatgaagggaaaattgaaaaattggaaatggaggtcttctaag
gatgcattcttaaacggtgcttattttgttccatctgggtatggtagttgtgacccaaat
tattctcctactcaatattttactgctgtacctgcttccttggtgcccgcaataactctt
aatgcaggtcccttgacttgtgttgttggtaaagcatgttaa
DBGET
integrated database retrieval system
