Glycine max (soybean): 100799386
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Entry
100799386 CDS
T01710
Name
(RefSeq) polyadenylate-binding protein 8 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
gmx
Glycine max (soybean)
Pathway
gmx03015
mRNA surveillance pathway
gmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100799386
09123 Folding, sorting and degradation
03018 RNA degradation
100799386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100799386
03041 Spliceosome [BR:
gmx03041
]
100799386
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100799386
mRNA cycle factors
Stress granule specific factors
100799386
Spliceosome [BR:
gmx03041
]
Complex C
Other components
Complex C specific factors
100799386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_occluded
RRM_RdRP1_2
RRM_7
RRM_Nup35
RRM_3
DUF5062
Motif
Other DBs
NCBI-GeneID:
100799386
NCBI-ProteinID:
XP_003523956
UniProt:
Q00M91
LinkDB
All DBs
Position
4:complement(3236055..3240661)
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AA seq
630 aa
AA seq
DB search
MAQVLENPTIDAAASGANPSLTTISLYVGDLHHDVNDPQLYDLFNQVAQVVSVRICRDVA
TQQSLGYGYVNFSNAHDAAKAIDVLNFTPLNGKIIRIMYSIRDPSARKSGAANVFIKNLD
KAIDHKALYDTFSAFGNILSCKVATDASGQSKGHGFVQFESEESAQNAIDKLNGMLINDK
QVFVGPFLRKQDRESALSGTKFNNVFVKNLLDSMTEADLERIFGEYGAITSAVVMRDVDG
KSKGFGFVNFANVDDAAKAVEALNGKNFDGKEWYVGKAQKKSERELELKGQHEQITKETV
DKYHGTNLYIKNLDDSVGDEELMELFSEFGTITSCKVMRDPNGISRGSGFVSFSIAEGAT
RALGEMNGKMVAGKPLYVALAQRKEDRRARLQAQFSQSRPAAITPNVSPRMPLYPLGAPA
IGQQFLYGQAAPATIPQAAFGYQQHFVPGMRPGGAPNFYVPLVQQGQQGQRPGGHRGSGP
MQQLQQPLPLMHQQMLPRGHVYRYPSGSNMQNIQLAGVPGGMVTYGIGQQMPTQALASAL
ANATPEQQRTMLGEALYPLVDKLEHEAAAKVTGMLLEMDQPEVLHLIESPDALKAKVVEA
MDVLKKVTQQQSNSPADQLASLSLNDNVES
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagttcttgagaaccccaccattgacgcggcggcttccggcgcgaacccctcg
ctgacgaccatctcgttgtacgtcggggatcttcaccacgacgtcaacgatccgcagctg
tatgatctcttcaaccaggttgcccaagtcgtttccgttcgaatttgcagggacgtggcc
acccaacaatcccttggttacggctacgtcaatttcagcaacgctcacgatgccgcaaaa
gcaattgatgtgctgaatttcactccactgaacggcaaaatcattaggataatgtactct
attcgggaccctagtgctcggaagagtggtgcagctaatgttttcataaagaatttggac
aaggcgattgatcacaaggctttgtacgatacattttcggcttttgggaatattctatct
tgcaaggttgcgacagatgcttctggccagtctaaaggccatggttttgtgcagtttgag
agtgaagaatctgcacaaaatgcaattgacaagttaaacggcatgctgatcaatgataag
caggtctttgtgggtcctttcctgcggaagcaggatagagagagtgctctcagtggcaca
aagtttaataacgttttcgtgaaaaacctgttggattcaatgactgaggctgacttggag
agaatttttggagaatatggagctattactagcgctgtagtgatgagagatgtagatggt
aaatcaaaaggttttggttttgtcaattttgcaaatgtagacgatgctgctaaagctgtg
gaggctcttaatggaaagaattttgatggtaaggagtggtatgttggaaaagcccagaaa
aagtctgaaagggagcttgaactgaaagggcaacatgaacagattacaaaggagactgtt
gataaatatcatggtacaaacttgtatatcaagaacttggatgatagtgttggtgatgaa
gaactcatggaactgttctctgagtttggtacgataacctcatgcaaggttatgcgagat
ccaaatggaattagtagaggatctggatttgtttcattttcaattgctgagggagcaact
cgggctcttggtgagatgaatggtaaaatggttgctggcaaacctctctatgttgccctt
gcacagagaaaagaagatagaagagcaaggttacaggcacaattttcacaatcgaggcct
gctgcaataacccctaatgtttcacctcgaatgcctctataccctctaggggctcctgcg
ataggacaacaatttttgtatgggcaagcagctccagccacgatacctcaagctgcattt
ggttaccagcagcattttgttcctggaatgaggccaggtggtgctccaaacttctatgtt
ccactggttcagcagggtcaacagggacagcgcccaggaggacaccgaggatcaggtcct
atgcaacagctccagcagccattgccattgatgcaccaacagatgcttccaaggggacat
gtctatcgatatccttctggctccaatatgcaaaatattcaactggcaggagtacctgga
ggaatggtcacttatggcattggtcaacaaatgcccacgcaggccctggcctcggccctt
gccaatgctactcctgaacagcagaggactatgcttggtgaagctttatacccgttagta
gataagctggagcatgaagcagcagcaaaggttactggtatgctcttagagatggatcag
cctgaggtattacatctgattgagtcaccggatgctctcaaggctaaagttgttgaggcc
atggatgtgttgaagaaagttacacagcagcaatcaaacagcccagccgatcaactggct
tcactctctctgaatgataatgtcgagtcttaa
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