Glycine max (soybean): 100799748
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Entry
100799748 CDS
T01710
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''delta isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
gmx
Glycine max (soybean)
Pathway
gmx03015
mRNA surveillance pathway
gmx04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100799748
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100799748
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmx01009
]
100799748
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100799748
03036 Chromosome and associated proteins [BR:
gmx03036
]
100799748
Protein phosphatases and associated proteins [BR:
gmx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
100799748
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
100799748
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
100799748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
DUF4187
Phage_Inh_C
Motif
Other DBs
NCBI-GeneID:
100799748
NCBI-ProteinID:
XP_003556454
UniProt:
I1NIM7
LinkDB
All DBs
Position
20:complement(45675073..45684197)
Genome browser
AA seq
537 aa
AA seq
DB search
MNMEVVTDAASLDVELLQLPEFSGLALKSNLNFIEKLFNQWLSLPESNRLVTSLLNEAKS
GVPLNVPGNCSSPNASSNSLPSMFPAGTAPPLSPRSTSGSPRIVKQRVGPSNLGSPLKVV
SEPVKEVIPQFYFQHGRPPPNELKEECLFKIDRLFYDHMDGMQVHEFKSITKEVCKLPSF
FSTSLFQKIDNGTGVVTRKTFIEYWIDGNMLVMDIAALIFKILKQPQLNYLTQDDFKPVL
RELLATHPGLEFLQGTPEFQERYAETVIYRIYYYINRSGNGCLTLRELKRGNIIDAMQHA
DEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFFIDKENLIRYGNHALTYRIVDRIFSQ
VPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVLTRNELQFFYEE
QLHRMECMAQEPVLFEDILCQIIDMIKPEDESVITLHDLKGGKLSGSVFNILFNLNKFMA
FETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDIEDASNGSAEVWDESLEAPF
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggaggtcgtcactgatgcggcgtcgttggacgtcgaattgttgcagctccca
gaattttctggtttggccctcaagtctaacctcaatttcatcgagaagctcttcaaccag
tggttgtcgcttcccgaaagtaatcgattggtaacatcattactcaatgaagcaaagtct
ggtgttcccttgaatgtcccagggaattgctctagtccaaatgcttcaagtaattctttg
ccttcaatgtttcccgctggcactgctcctcctctttcaccaagaagtacatctggttcc
cctcgcattgtgaaacagagagttggcccttctaatttgggttctcccttgaaagttgtt
agcgagccagttaaagaagtgatacctcagttctactttcaacatggacgtccacctcca
aatgaactgaaagaagaatgcttgtttaaaattgatcggctattctatgatcatatggat
ggcatgcaggtgcatgaattcaaatcaattactaaggaagtttgcaagctgccatctttt
ttttccacttcccttttccagaagattgacaatggaactggtgttgtgacaaggaaaaca
tttattgaatattggattgatggcaacatgctggtgatggatatagctgctctaatattc
aaaatattaaagcaaccacagctgaattaccttactcaggatgattttaaacctgttcta
cgtgagcttttagctactcatccagggctggagttcctgcagggcacgcctgagtttcaa
gagagatatgctgaaactgtaatatacagaatctattattacattaatagatctggaaat
ggttgtctcaccctgagggagctgaagcgtggaaacataattgatgcaatgcagcatgct
gatgaagaagaagacatcaacaaggttttgaggtacttctcttatgagcatttttatgtt
atatactgcaaattttgggagctggatacagatcacgatttctttatagacaaagagaat
cttatcagatatggtaaccatgcgcttacctatcgaattgttgatagaatattttctcag
gtcccaagaaagtttaccagtaaggttgagggaaagatgggatatgaagattttgtttac
ttcatactgtcagaagaggataaatcatctgaacctagtcttgagtactggttcaagtgc
atagatttggatggaaatggagttctgacaaggaatgaactgcaatttttttatgaggaa
caattgcatcggatggagtgcatggcccaagagcctgtgctttttgaggacatattgtgt
cagataattgacatgattaaacctgaggatgagagtgttataactctgcatgacctgaaa
ggcggtaaactttcaggaagtgttttcaacatcctgttcaacctaaataagttcatggcc
tttgaaactcgtgacccatttttgatccgtcaggaacgtgagaacccaacattgacagag
tgggatcgatttgctcatcgagaatatattaggctttcaatggaagaagacatagaagat
gcctctaacggaagtgcagaagtctgggatgaatcactagaggctcccttctaa
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