Glycine max (soybean): 100799852
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Entry
100799852 CDS
T01710
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmx04131
]
100799852
Membrane trafficking [BR:
gmx04131
]
Protein recycling
Others
EARP complex
100799852
Endosome - Golgi transport
Tethering complex
GARP complex
100799852
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
RINT1_TIP1
COG7
COG4_N
Vps54_N
COG4_m
DUF401
Motif
Other DBs
NCBI-GeneID:
100799852
NCBI-ProteinID:
XP_003535023
UniProt:
I1L088
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Position
9:1429771..1439977
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AA seq
820 aa
AA seq
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MDKSSALEYINQMFPNEASLSGVEPLMQKIQNEIRTVDAGILAAVRQQSNSGTKAKEDLA
AATRAVEELMYKIREIKTKAVQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA
VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKIVELRDKFKNIKQILKSHVFSD
FSSLGTGKETEETNLLQQLSDACLVVDALEPSVREELVNNFCNRELTSYEQIFEGAELAK
LDKTERRYAWIKRRMRSNEEIWKIFPSSWHVSYRLCILFCKKTRKQLEDILGNLKEKPDV
GTLLLALQRTLEFEDELAEKFGGGTQNREIGNEIEEIGKGTNSSSSAMDIRKKYEKKLAA
HQGGDSEEKDGSKDLAVPGAGFNFRGIVSSCFEPHLTVYVELEEKTLMESLEKLVQEETW
DIEEGSQSNVLSSSMQLFLIIKRSLKRCSALTKNQTLYNLLKVFQRVLKAYATKLFARLP
KGGTGIVAAATGMDGQIKTSDRDERVICYIVNSAEYCHKTAGELAESVSKIIDPQYSDGV
DMSEVQDEFSAVITKSLVTLVHGLETKFDMEMAAMTRVPWGTLESVGDQSEYVNAINLIL
TISIPALGSLLSPVYFQFFLDKLASSLGPRFYSNIFKCKQISETGAQQMLLDTQAVKTIL
LEVPSLGRQTSGAASYSKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRI
LELKGLKKADQQSILDDFNKHGPGIKQTQIAPSIVPAAAPVAPVVPSPSAIGLIASREDV
LTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNP
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtcaagcgctctggagtacatcaaccagatgttccccaacgaggcgtctctc
tccggcgtggagccgctgatgcagaaaatccagaacgagattcgcaccgtcgatgccgga
attctcgccgccgttcgccagcagagcaactcaggaactaaggcgaaggaggatctcgct
gctgccacacgtgccgtcgaggaacttatgtataagatccgagagataaaaactaaagct
gtgcagagtgaaacaatggttcaagaaatatgccgtgacattaagaaactggactttgcc
aagaagcatataactaccacaattactgcacttcaccggcttacaatgcttgtctctgct
gttgaacaacttcaagtcatggcttcaaaacgtcaatataaagaggcagctgcgcagctg
gaggcagtgaaccagttatgtagtcactttgaggcctatagggatattccaaagatcgta
gaactaagagacaagtttaaaaatatcaaacaaatactcaagtcacatgtgttttctgat
ttttctagcttaggtactggaaaggagacagaagaaactaatttgctacagcagttgtct
gatgcctgcctggttgttgatgcattagagccttctgtaagggaagaattggtaaataat
ttctgcaatagggagcttacatcgtatgagcaaatttttgaaggagctgaacttgcaaag
ttggataaaactgaacgaagatatgcatggattaagcgccgaatgagatcaaatgaagaa
atttggaaaatctttccttcttcatggcatgtttcttatcgtctctgtatcctattttgc
aagaagacaaggaaacaactagaggacattcttggtaatctaaaggaaaagccagatgtt
gggaccttattattggctttacaaagaactttagagtttgaggatgaattagctgagaaa
tttgggggaggcactcaaaacagagagattggaaatgagattgaagaaataggtaaaggg
actaattctagtagtagtgccatggatatccggaagaagtatgaaaaaaagcttgctgca
catcaaggaggtgacagtgaagaaaaagatggaagtaaagatttggcagtgcctggagct
gggttcaacttccgtggaattgtttcatcttgctttgaacctcacttaacagtatatgta
gaattggaagagaagacactgatggaaagtctggagaaacttgttcaggaagagacatgg
gatattgaggagggaagtcagagtaatgttttatccagtagcatgcagttgtttcttata
atcaagagaagcttgaagagatgcagtgctttaacaaagaaccagacactttacaatttg
ttgaaggttttccaaagagttcttaaagcatatgctacaaagctctttgctagactccca
aaggggggcactggaattgttgctgcagccacaggcatggatggacaaataaagacatct
gatagggatgaaagagtgatctgttacattgtaaattcagctgaatattgccacaaaacg
gctggtgaactggctgaaagtgtttctaaaataattgaccctcaatattcagatggggtg
gatatgtctgaagtgcaggatgaattctcggccgttataacaaaatcattggtgacctta
gtgcatggcctggaaactaaatttgacatggaaatggctgcaatgacacgtgtcccttgg
ggtactcttgagagtgttggtgatcaatcagagtatgttaatgccataaatttgatcctg
accattagcattcctgcacttggaagtcttctttcacctgtctactttcagttctttctg
gataagcttgcatcatctcttggtccacgcttttattctaacattttcaaatgcaagcaa
atatcagaaactggagctcaacagatgctattagatacccaagctgtaaagacgattctt
cttgaagttccttcccttggtagacagacatcaggtgctgctagttattccaagtttgta
agccgcgagatgagcaaagccgaggcccttttaaaggttatactttctccagttgattct
gtagcagatacttaccgtgcattgctacctgagggtacacccatggaatttcaacgaatc
ctggagcttaagggtctgaaaaaagctgaccaacaaagcattcttgatgacttcaacaaa
catgggcctggaattaagcaaactcagattgcaccttcaattgtgccagcagctgctcca
gtagctcctgtggtacctagcccctctgctattggactcatagcgtcgcgagaggatgtt
cttactagggctgctgcacttggacgaggagctgccaccactgggttcaagcggttccta
gctctaactgaagccgccaaagacaggaaagatgggcctttcaggaagctctttaatcca
taa
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