Glycine max (soybean): 100799998
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Entry
100799998 CDS
T01710
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
gmx
Glycine max (soybean)
Pathway
gmx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100799998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100799998
03036 Chromosome and associated proteins [BR:
gmx03036
]
100799998
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100799998
Coactivators
SAGA/TFTC/STAGA complex
100799998
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100799998
STAGA complex
100799998
TFTC complex
100799998
SAGA complex
100799998
SLIK complex
100799998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
CBFD_NFYB_HMF
CCDC47
Histone
Motif
Other DBs
NCBI-GeneID:
100799998
NCBI-ProteinID:
XP_003532152
UniProt:
I1KYD8
LinkDB
All DBs
Position
8:43518166..43524930
Genome browser
AA seq
539 aa
AA seq
DB search
MSFVPKETIEVIAQSIGITNLSPDVALALAPDLEYRIREIMQESVKCMRHSMRTFLTTED
VDTALALRNLEPIYGSTSNDPPQFKRAAGHKDLFYIDDKDVDIKDIIEAPLPKAPLDTSI
TSHWLAIEGVQPAIPENAPVEAPSEIRKSEYKEDGLPVDVKLPVKHLITRELQLYYEKIT
DLTLNKPGSIPFRRALVSLATDSGLHPLVPYFTFFVADEVAQNLNNLAVLFALMRLVRSL
LQNSQIHIELYLHQLMPPIITCIVAKRIGNRLSDDHWELRNFSANLVASICQRFGHIYHN
LQPRVTKTFLHSFLDPTKALPQHYGAIKGIEALGSRLIRLLILPNLEPYLHLLEPEMQPE
KQKNEMKRHEAWQVYGALLGAAGQCVHEKVKMFSNLFSPPTRVTSRGSGKAVIAMSGKRK
ASTDNLMQQQQQLPPMKKLATDGPGGVVAMNSMLVDMQGSTGGYSSMMGVSSMSMARQIS
IDNVPGREVGDQQRKLSSTLAQAWKDDIDTGNLVSSVVELFGESVLPFVVSNPEACMFL
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgtgccaaaggagacaatcgaagtcatcgcacagagcatcggcatcaccaac
ttgtcccccgatgttgccctcgctctcgctcccgatctcgaatatcgcattcgcgaaatc
atgcaggaatcggtaaaatgcatgcgccattcaatgagaacttttcttactacagaggat
gtggatactgcacttgcattgagaaatttggagccaatatatgggtccacctctaatgat
cctccgcagttcaaaagagctgctggacacaaggatttgttctacattgatgacaaagac
gtggatatcaaagatatcattgaagctcctttaccaaaagcaccccttgatacatcaatt
actagccactggttggctattgaaggtgtgcaacctgcaattcctgaaaatgctccagtt
gaagctccctccgagataagaaaatctgaatataaggaagatgggcttcctgttgatgtt
aaattacctgttaaacatttaataacaagggagcttcagctttactatgagaaaataact
gacctaactttaaataagcctggatccattccttttagaagagcattggttagcttggca
acagactcgggactccatcccttagttccttatttcacattttttgttgctgatgaggtg
gcacagaatttaaataatttagctgttttatttgccttgatgcgccttgtgcggagcctt
ttgcaaaattctcagatacacatagaactttatttacatcaattgatgccacctatcatt
acttgcattgttgcaaaaaggataggaaacagactatctgatgatcactgggagcttcgg
aacttcagtgctaatcttgttgcttcaatatgccaaagatttgggcatatttatcacaat
ctgcagccacgtgtgacaaagacatttcttcattctttcttggaccctacaaaagctttg
cctcaacactatggtgcaattaaagggatagaagctctcggatcaagactgattcgcttg
cttatacttccaaatctcgagccatatttgcatcttcttgagccagaaatgcaacctgag
aagcaaaaaaatgaaatgaagaggcatgaagcttggcaagtttatggggctttgttgggt
gcagcaggacaatgcgtgcatgaaaaggtcaaaatgtttagcaatttgttctctcctcca
actcgggttacttcaagaggcagtggaaaagctgtgattgcgatgtcaggcaaacgaaaa
gccagcactgacaatctgatgcagcagcagcagcagctgcctccaatgaagaaacttgca
acggatggccctgggggtgtggtagcaatgaactccatgttagttgacatgcaaggttca
acaggtggatattcctccatgatgggggtttcttcaatgtcaatggctcgtcaaatatcc
atcgacaacgtgccggggagggaggttggagatcaacaaaggaagttgtcgtccactctt
gctcaggcttggaaggatgacattgatacaggaaatttggtgtcatcagtggttgaatta
tttggcgaaagtgtgttgccgtttgttgtttcaaaccctgaagcatgtatgtttttgtag
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