Glycine max (soybean): 100800148
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Entry
100800148 CDS
T01710
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100800148
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
100800148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
100800148
NCBI-ProteinID:
XP_040873128
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Position
7:complement(1220928..1225327)
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AA seq
659 aa
AA seq
DB search
MASYRPFPPQSSQIPNPIPGGNHQYNNNQNQNWGAYGDPSTSSFPQIPPNSNYHQNQQHH
VPYAPPNPHHPHYPYPPPPPPPPPEASYQPPPPPPPAPMYYPSNNQYSNQPPPPPPPLSP
PPPPPPVSPPPPPAVTQNNEERHFKEPSTSGRREYEHSNHGIAHKQHKQQPPVPVKKMNN
GPPGRAETDEEKRLRKKREFEKQRQEEKHRQQLKESQNTVLQKTHMLSSGKGHGMIAGSR
MGERRSTPLLGAERVENRLKKPTTFLCKLKFRNELPDPSAQPKLMASKKDKDQYAKYTIT
SLEKMYKPKLFVEPDLGIPLDLLDLSVYNPPSVRPPLAPEDKELLRDDEAVTPIKKDGIK
RKERPTDKGVAWLVKTQYISPLSMESTKQSLTEKQAKELREMKGGRGILDNLNSRERQIR
EIEASFEAAKSDPVHATNKDLYPVEVMPLLPDFDRYDDQFVVAAFDNAPTADSEMHAKMD
KSVRDAFESKAVMKSYVATSSDPANPEKFLAYMVPAPGELSKDIYDENEDVSYSWIREYH
WDVRGDDADDPATFLVAFDESEARYLPLPTKLVLRKKRAKEGRSGDEVEQCPVPARVTVR
RRSSVAAIERKDSGVYTSSKGNSSKRGGLEMDDGLEDQHRGAPHQDNYQSSGAEDYMSD
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttacaggcccttccctcctcaatcgagtcaaattccaaaccctatcccaggt
gggaatcatcagtataataataatcaaaatcaaaattggggtgcttatggagatccctct
acttcttcattcccccaaatccctccaaattccaattatcatcaaaatcaacaacatcat
gttccatatgcacctccaaatccccaccaccctcactatccatatccaccaccacctccg
ccgccgccaccggaggcttcataccagcctccaccaccaccaccaccagctcctatgtat
tatccctctaataatcagtatagcaaccagccacctccaccgccgccgcccttgtcccca
ccaccaccacctcccccggtttcgccccctcctcctcccgcggtaactcagaacaacgaa
gagcggcacttcaaggagccttccacgtccggccggcgtgaatacgagcattccaatcac
ggcattgctcacaagcagcacaagcagcagcctcctgtgccagtgaagaagatgaacaac
gggcctcctggcagggctgagaccgatgaagagaagaggttgaggaaaaagagggagttt
gagaagcagaggcaggaggaaaagcataggcagcagctcaaggagtcccagaacactgtt
ctgcagaagactcacatgttgtcctctgggaaggggcacggcatgattgcagggtctcga
atgggagaaaggagatctactcccttgttgggtgctgagagggttgaaaataggttgaag
aagcccacaacgtttttgtgtaagctcaaatttcgaaatgaacttccagatccaagtgct
caacctaagcttatggcctccaaaaaagataaagatcaatatgcaaaatatacaatcaca
tctctggagaaaatgtacaaacccaagctttttgtggagccagatctagggatacctcta
gatcttcttgatctcagtgtttacaatcctcccagtgtcagaccacctcttgctccagaa
gataaagaattgttgcgagatgatgaagctgttactcctattaaaaaagacggcataaaa
agaaaagagaggcctactgataaaggtgttgcatggcttgtcaaaacacaatatatatct
cctctaagcatggagtcaacaaagcagtctttaactgagaaacaagctaaggagctgaga
gagatgaaaggaggtcgtggcattttggacaatctcaacagtagggaaagacaaatcagg
gaaattgaagcatcatttgaagcagctaagtctgatcctgttcatgcaaccaacaaagat
ttgtatcctgttgaggttatgccgttgctgcctgattttgataggtatgatgatcagttt
gttgttgctgcatttgataatgctccaacagctgattcagaaatgcatgctaagatggac
aaatctgttcgtgatgcctttgaatcaaaggcagttatgaaaagttacgttgcaacgagt
tctgatcctgctaaccctgagaagtttttggcttatatggtcccagcaccaggagagctg
tcaaaggatatatatgatgaaaatgaagatgtctcgtactcttggatacgcgagtatcat
tgggatgttcggggtgatgatgcagatgatcccgcaacattcttagttgcatttgatgag
tcagaagcacgctacttgcctcttccaactaaacttgttttaagaaaaaagagggcaaaa
gagggaagatcaggtgatgaggttgagcaatgtccagtacctgcaagagtgactgtaagg
cgaaggtctagtgttgctgcaattgagcggaaggattctggggtatatacaagttcaaag
ggaaattcctcgaaaagaggtggcttagaaatggatgatggtctcgaagaccaacataga
ggtgcaccacaccaggacaactatcagtctagtggagcagaagattacatgtctgattga
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