Glycine max (soybean): 100800213 Help Entry 100800213         CDS       T01710                                  Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism gmx  Glycine max (soybean) Pathway gmx03040   Spliceosome gmx04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:gmx00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     100800213   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     100800213  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:gmx03041]     100800213    04121 Ubiquitin system [BR:gmx04121]     100800213    03400 DNA repair and recombination proteins [BR:gmx03400]     100800213 Enzymes [BR:gmx01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      100800213 Spliceosome [BR:gmx03041]  Complex B   Other components    Prp19 complex     100800213  Complex C    Prp19-CDC5 complex     100800213 Ubiquitin system [BR:gmx04121]  Ubiquitin ligases (E3)   U-box type E3    100800213 DNA repair and recombination proteins [BR:gmx03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     100800213 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd WD40_Gbeta WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_EML Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_WDR41 NBCH_WD40 Beta-prop_DCAF4 U-box PROPPIN PEP5_VPS11_N Beta-prop_DCAF12 PAS_11 Beta-prop_ACSF4 zf-Nse Beta-prop_VPS8 WD40_like PUMA_CC V_ATPase_I_N Motif Other DBs NCBI-GeneID:  100800213 NCBI-ProteinID:  XP_003535988 UniProt:  I1LAQ3 LinkDB All DBs Position 10:36016855..36037809 Genome browser AA seq 525 aa AA seqDB search MNCSISGEVPEDPVVSRNSGLLFEKRLIERHISDYGKCPITGEPLTMDDIVPIKTGKIVK PRPVQAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK ERDEARSVLAQAERQFPASAPNAITANDPVLSNGKRAAEDEDLAPGAKKIHPGISSSIIS ELTDCNASLSQQRKKRQIPATLAPVEALEAYTQISSHPFHKTNKQGIISLDILYSKDLIA TGGIDTNAVIFDRPSGQILATLSGHSKKVTSVKFVAQGESFLTASADKTVRLWQGSDDGN YNCRHILKDHTAEVQAVTVHATNNYFVTASLDGSWCFYELSSGTCLTQVYDTSGSSEGYT SAAFHPDGLILGTGTTESLVKIWDVKSQANVARFDGHAGPVTAISFSENGYFLATAAHDG VKLWDLRKLKNFRNFAPYDSETPTSSVEFDHSGSYLAVAGSDIRIYQVANVKSEWNCIKT FPDLSGTGKNTCVKFGSDSKYIAVGSMDRNLRIFGLPGEDAPTES NT seq 1578 nt NT seq  +upstreamnt  +downstreamnt atgaattgctccatctccggcgaagttccggaagatcccgtcgtgtcccggaactccggt ctcctcttcgagaagcgtttgattgagcgacacatctcggattatgggaagtgtccaatt actggagaaccacttactatggatgacattgtaccaatcaagacaggcaagatagtgaaa cccagacctgttcaggcagctagcatccctggcatgcttggaatgttccaaaatgaatgg gatggattgatgctatctaattttgcattggagcaacaattgcacacagcaagacaggag ctgagtcatgctctgtatcagcatgatgccgcttgccgagttattgcaagactaaaaaag gaacgagatgaagctaggtctgtacttgcacaagcagaaaggcagttccctgcttctgca ccaaatgccataacagcaaatgaccctgtcctgagcaacgggaaaagagctgctgaggat gaggatctggctcctggtgcaaagaaaattcatcctggaatatcttctagcataatttcc gagctaactgattgcaatgcttctctttcccagcagagaaagaagcgacagattcctgca actttggctcctgttgaagctctagaggcatatacccagatatctagtcacccctttcac aaaacaaacaaacaagggattatatctcttgatatcctttattctaaggatttaattgca actggaggtattgatacaaatgctgttatttttgaccgaccatcaggacagatattagct acgctcagtggtcactctaaaaaggtgaccagtgtaaagtttgtagctcagggtgaatca ttcttaactgcttcagcagataagacagttcgactatggcaagggtcagatgatggtaac tacaactgcaggcacatcttaaaggatcatacagctgaggtgcaagctgtcactgtccat gcaaccaataattactttgtgactgcttcacttgacggctcttggtgcttttatgaactt tcttcagggacatgtctgactcaggtttatgacacttcaggttcttctgaagggtacact tctgcagcttttcatcctgatggtcttattcttggaaccggcaccacagaatctcttgtc aagatttgggacgtaaaaagtcaggcaaatgttgctaggtttgatggacatgctgggcca gtaactgccatatctttctctgagaatggatacttccttgcgactgctgctcatgatggt gttaagctttgggatctacgtaaattgaagaacttcaggaattttgctccatatgattca gaaacaccgacgagctccgtggagtttgatcacagtggatcctacctagcagttgctggc tctgatataaggatttaccaagttgcaaatgtaaaatctgaatggaactgtatcaaaacc ttccctgatttatccggaacagggaagaacacgtgtgtaaaatttggttcagattctaaa tacatagcagtgggatcaatggaccggaatcttcggatattcggcttgcctggcgaagat gctcctactgagtcataa

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