Glycine max (soybean): 100800361
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Entry
100800361 CDS
T01710
Name
(RefSeq) uncharacterized protein LOC100800361 isoform X1
KO
K19026
spatacsin
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmx03400
]
100800361
DNA repair and recombination proteins [BR:
gmx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100800361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
100800361
NCBI-ProteinID:
XP_003532852
UniProt:
K7L6P3
LinkDB
All DBs
Position
8:complement(10981862..11006675)
Genome browser
AA seq
3217 aa
AA seq
DB search
MDFSLGSEDPPILKLHKWDLSEAQIGLSDFREAFLSPTREILLLHSYEREALLLPLSKGE
LHSGGAEGGYDYDDNHNPGSANVSSEASTRPSESVLVNDSPCTSGSDVDIDTDLVGIKCS
KSNSLPYISDVNSLAWARCEDGYDQHKDALFREVLFVSGRCGVTVHAFLKLTKTKGMVQP
MLEGNFRQGRWVEWGPVAALSSDFSHGVSGDQNVNLTGDGGVESLRGSATKRYLESFFTK
VETTVSDGILLTKFPENNEFPCLTEVVSFSIFDGSLSLDHLLKEKTVQSKENWQEPVDSA
RDASDRSSLSFCGADTKLDCFSSVFGVVINGFYECRRVFSGASNCLVGFFLTLMHHVSVN
ISDEDQRGRSRDLLLVAKLDNWGIRWVSMVKLDERINTVQSVEWMDFQFSDNLLVCLNSS
GLIVLYSAMSGEYVTHLNVLQACGLNPHFNLQGLEKLYSHDNIYAKQECSINDNMSDQQS
DSFRGSFKRLVVASHSSLLAVVDECGVIYVISLGEYIPDKIYSSEKLLPYCQQFVQGMLV
GWEVGGSDIDRQAVYSNLSGHFRSNDLNIKHGNVALSDKAVAGNALQKINGCTFKEKGDL
FGSYSSGFSATSKVNNGHTFLGYDVKLPVMRKIFLPNFRVCEDDSICFSPLGITIFSKKK
CVKNQNSSQLIHFNLEVKLEVHDDNFLDSVYDVYHFDGKDVIGEAIGCTFQGCFYIVRDG
GLSVYIPSISILSNFLPVEYIGYRQSSKDMEISVLLKDNLEIKEPIKRFSPWKVEILDRV
LLYEGTEMADQLFLKNGWDIKVSRIRQLQIALDYLKFYEIERSLEMLVDVDLAEEGILRL
LFAAVYLIFNKGGNDSETPAASRLLALAACFATKMLHKYGLLQHKKDTCIAEGFNKMGLL
SLPPIEPVKLQTEVDFAQKLCEIAHFLEIIRNLQCRHRSIFQRASQGLADRGEESSLIST
DMLQEESQLSILPSDLESLDVLNQHELSFPRPGSNNNENLALVPVDSESHLVSDEFGYIS
HLTPLGGILGKKVLPVENPREMMARWKVDNLDLKTVVRDALLSGRLPLAVLHLHQMNDFV
ADKEPHDTFTEVRDIGRAVAYELFLKGETELAVATLQRLGENVESYLKQLLFGTVRRSLR
IQIAEEMKRYGYLGPYEWKILDDMSLIESLYPSSSFWKSYNHRLKEISIAPDSVLPVENK
LRLLHNHSFDSHVIECGEIDGIVFDAWIDISESSSALEVDEDDAHVGYWAAAAVWFDAWD
QRTVDRMILNQSVHSDNSILWESQLEYHVCRNHWKEVFRLLNLMPAYVLSAGSLQLNLDL
VEPASSLGCNMNMKSSNYGNFLCSFEELDSVCMEVPNVQMYRFSPDICSGWMRMLVEEKL
AKRFIFFKEYWEGTLEMIALLARSGFISGRDKVCLEDDLTKTSSVRDGAVQALHKIFVHH
CAQNNLPNLLDLYLDHHSLVLDNDSLYALQETAVDCEWARWLLLSRVKGCEYEASLANAR
SIMSRNLVPRSDLSVLELDEIIRTVDDIAEGGGEMAALATLMHAAVPIQSCLNSGGVNRH
SNSSAQCTLENLRPTLQKFPTLWRTLIGACLGQDTMALLVPKAKTALSDYLNWRDDIFFS
TSHDTSLLQMLPCWFPKPIRRLIQLYVQGPLGCQSFSGFPTGETLLHRDIDLFINADVHA
EINAISWEATVQRHIEEELYGPLLEENGFGLEHLLHRGRALAAFNQILGHRVQNLKSEEE
SSTSAHGQTNIQSDVQTLLSAVEQSEETLLSSVLPVAIMHFEDSMLVASCAFLLELCGLS
ANKMRIDIAVLKRISLFYKSSENNENLWQLSPKGSVFHAISHEGDVTESLARALADEYLH
KDSPATATETVSKQASRALILVLHHLEKASLPQLVDGKTYGSWLLSGNGDGNELRSQRKA
ASQHWTLVTNFCRLHQLPLSTKYLAALARDNDWIEFLSEAQIGGYSFDTVVQVASKEFSD
PRLRLHMLTVLRGMQSKKKASTALFLDTLEKGSETTFPDENMCVPVELFQILAECEKQKC
PGEALLRKAKELSWSILAMVASCFLDVSPLSCLTVWLEITAARETSSIKVNDIASQIADN
VGAAVNATNALPVGDRVLTFHYNRQSPKRRRLITLVSLDSSASAISDICSSSISEEIFDS
KGKTMENDRKIEHFGCINVPSDSHEGPASLSKMVAVLCEQQLFLPLLRAFEMFLPSCPLL
PFIRALQAFSQMRLSEASAHLGSFSARIKEEPFYLQANVGREAQIGASWISSTASTAADA
VLSTCASPYEKRCLLQLLAATDFGDGGHTAAHYRRVYWKINLAEPLLRKDNELHLGDEIS
DDASLLSALENNRHWEQARNWAKQLEPNGAPWKSAMHHVTESQAESMVAEWKEFLWDVPE
ERVALWSHCHTLFIRYSFPSLQAGLFFLKHAEAVEKDLPARELHELLLLSLQWLSGMISL
SNLVCPLQLLREIETKVWLLAVESETQVKSEGDFNFTFSTRESGIKNDPSIIDRTASIIA
KMDNHINTMRSRIVEKYESRENNQIPHKNQVMDAGLSTTFGGNTKTKRRAKGYMAPRRPP
LESADKSADTDDGSSTNSLKNEFQLQEENVKVEMSFSRWEERVGAAELERAVLSLLEFGQ
IAAAKQLQYKFSPGQIPSEFRLVDAALKLAAISTPPSNVSVPMLDEEVRSVMHSYGIMND
KHYVDPLQVLESLVTIFIEGNGRGLCKRIIAVIKAANTLGLSFSEAFNKQPTELLQLLSL
KAQDSFEEANFLVRTHPMPAASIAQILAESFLKGVLAAHRGGYMDSQKEEGPAPLLWRFS
DFLKWAELCPSEPEIGHALMRLVITGQEIPHACEVELLILSHHFYKSSSCLDGVDVLVAL
ATTRVDAYVLEGDFPCLARLITGVGNFYALNFIFGILIENGQLDLLLQKYSAAADTNTGT
AEAVRGFRMAVLTSLKHFNPNDLDAFAMVYNHFDMKHETAALLESRAEQSCEQWFRCYNK
DQNEDLLDSMRYFIEAAEVHSSIDAGNKTRKDCAQASLLSLQIRMPDFQWLYRSETNARR
ALVEQSRFQEALIVAEAYNLNQPSEWALVLWNQMLKPEVMEEFVAEFVAVLPLQPSMLFD
LARFYRAEVAARGDQSHFSVWLTGGGLPAEWAKYLGRSFRCLLKRTRDLKLRTQLATVAT
GFGDVIDACTEEMDKVPDNAAPLVLRKGHGGAYLPLM
NT seq
9654 nt
NT seq
+upstream
nt +downstream
nt
atggatttttccttgggtagtgaggatccacctatacttaagctgcacaaatgggacctg
tctgaggcccaaattgggctttcggactttcgcgaagcttttctttctcctacgagagag
atactgcttttgcattcttatgagagggaagctcttttgcttcctctgagtaaaggagag
ttgcattctggtggtgctgaaggtggctatgattatgatgataatcacaatccaggttct
gcaaatgtttcctcggaggcatccactaggcctagtgaatcagttttggtgaatgattca
ccttgcacttcaggttcagatgttgatattgatactgatcttgtgggaattaaatgttca
aaatccaatagtctcccatacattagtgatgtgaactcattggcctgggctcgctgtgag
gacggctatgatcagcacaaagatgctttatttagagaggttctatttgtttctgggaga
tgtggggtaacagtccatgcttttctcaaactaacaaaaaccaagggaatggttcaaccc
atgttggagggtaactttaggcaaggcaggtgggttgaatgggggcccgttgctgcatta
tcttccgacttcagtcatggagtctctggagaccagaatgtaaatttgactggagatggt
ggagttgaatcattaagaggttctgctactaagagatacttagaatcatttttcacaaaa
gttgaaactactgtatctgatggtattcttttgaccaaattccctgagaataatgaattt
ccttgcttgacagaagtggtttcttttagcatatttgatggcagtctatctttggaccat
ctcctcaaagaaaaaacagtccaaagtaaggagaattggcaggaaccagttgattcagca
agagatgcttctgaccgctctagcttgagcttttgtggagcagatactaagcttgattgt
ttttccagtgtttttggtgttgtgattaatgggttctacgaatgtcgcagagtgttctcg
ggtgcttcgaattgcctggtaggattttttttgacattaatgcatcacgtgtctgtcaat
attagtgatgaagatcaaagaggcagaagcagagatttacttcttgttgccaagttagat
aattggggtattcggtgggtttcaatggtgaagcttgatgaaagaataaacacagttcag
tcagttgagtggatggatttccaattttctgataatcttcttgtctgtcttaattcttct
ggcctgattgttctctactctgcaatgtctggtgaatatgtgacacatttaaatgtttta
caggcttgtggccttaaccctcattttaatttgcaagggttagaaaagttatattcacat
gataatatatatgctaaacaagagtgtagcataaatgataacatgtctgatcagcagagt
gattcttttaggggatcattcaagaggttagttgttgcttcacactcctccctgttagct
gtggttgatgaatgtggtgtgatctatgtgatctctttgggggaatacatacctgacaaa
atttactcatctgagaagttacttccgtattgtcagcaatttgtgcagggaatgctggtt
ggctgggaagttggtggttctgatatagatcgccaagcagtatactccaatttatctgga
cactttcgatcaaatgatttaaacataaaacatggaaatgttgctttgtcagacaaagct
gtggcaggtaatgcacttcagaaaattaatggctgcacattcaaagaaaagggggatttg
tttggctcctattcaagtggtttttctgctacttctaaagtaaataatggtcacacattt
cttggttatgatgtgaaattacctgttatgagaaagatattccttcccaattttagagtc
tgtgaggatgattctatttgtttttctcctttgggaattactattttctctaaaaagaag
tgtgtaaagaatcagaatagttctcaacttatccattttaatttggaagtgaagttagaa
gtccatgatgacaacttcttagacagtgtatatgatgtataccactttgatggaaaagat
gttattggagaagcaattggttgcacattccaaggttgtttttatattgtgagagatggt
ggtctatcggtatatattccctccatttcaattttatcaaattttcttcctgttgagtac
attggttatcgccaatcaagtaaggatatggagatttcagttctacttaaagacaatcta
gaaataaaagaaccgatcaaaaggttttctccttggaaagttgaaattttggacagagtt
cttctgtatgaaggcactgaaatggcagatcaattgtttttgaaaaatggatgggacatc
aaagtttctcgtattcgtcaattacaaatcgcattggactacttgaaattttatgaaata
gaaagatctttggaaatgctcgtggatgttgatctagcagaagagggaattttgagattg
ctttttgctgctgtgtatcttatatttaataaaggtggcaatgatagtgaaactcctgct
gcttcaaggcttcttgccctggccgcttgctttgcaacaaagatgctccataaatatggg
ttgctacaacataaaaaagatacatgcatagcagagggctttaacaagatgggattactt
tctcttccaccaattgaaccagttaaactacaaactgaggtggattttgctcagaaactt
tgtgagatagctcatttcttggagatcatccgaaatctgcaatgtagacataggtcaata
tttcaaagggccagtcaaggattggctgacagaggagaagagtcatctttaataagtaca
gacatgttgcaggaagaatcccaactttcaattcttccatcagatttagagtcattggat
gtgttgaaccaacatgagctttcttttcctcgaccaggcagcaacaataatgaaaatctt
gcgctggtgcctgttgattctgagtctcatttggtctcagatgaatttggctacatatct
catttaaccccattaggaggaatcttaggaaagaaagttttgcctgtggaaaatccaaga
gagatgatggcacgttggaaggtagataatctggaccttaagactgtggttagagatgct
ttgctctctggccgtcttcctttggcagttctacatcttcatcaaatgaatgattttgtt
gctgataaagagcctcatgatacttttactgaagttcgtgacattggcagagctgttgct
tatgaattatttttgaagggtgaaactgaacttgctgttgctacacttcaaagacttgga
gagaacgttgaatcttatcttaaacaacttctgtttggcactgtaaggagatccttgcga
atccagattgctgaggaaatgaaaagatatggttatctaggaccatatgagtggaaaata
ttggatgatatgtcactgattgagagtctctatcctagcagtagcttctggaaatcatat
aatcaccgactgaaagaaatcagcattgcaccggactctgttttaccagtggaaaataaa
ttaaggctcttgcataaccattcatttgatagtcatgtcattgaatgtggtgagattgat
ggaattgtctttgacgcatggattgatattagtgaaagttcctctgctctggaagttgat
gaagatgatgctcatgttggatattgggctgctgctgctgtctggtttgatgcctgggac
caaagaactgttgatcgtatgatattgaatcaatctgttcattcggacaattctatattg
tgggagtcacaacttgaatatcatgtttgtcgtaaccactggaaggaagtctttagactg
ctgaacttgatgcctgcatatgtcctatcggctggaagccttcaactcaatttggatctt
gtagagcctgcctcatctttaggatgcaacatgaatatgaagtcttctaattatggaaat
ttcttgtgctcttttgaagaattggattctgtatgcatggaagttcccaatgtccaaatg
tataggttttcacctgatatatgttctgggtggatgaggatgctcgtggaggaaaagctt
gcaaaaagatttatattttttaaggaatactgggaagggacattggagatgatagctctc
ttagctcgttcaggtttcatatctggcagagataaggtctgcttggaggatgatcttact
aagacgtcatctgtcagagatggagctgtacaagctttgcataaaatatttgtgcatcac
tgtgcacaaaataacttgccaaatcttttggacctttaccttgatcatcatagtttggtc
cttgacaatgattcactttatgcattacaggaaactgctgttgattgtgaatgggcaaga
tggctactcttatcgagagttaaggggtgtgaatatgaggcctcacttgccaatgctcga
tcgataatgtcacgtaatttagttcctagaagtgacctcagtgttctggagttagatgaa
ataattcgaactgtcgatgacattgctgaaggagggggagaaatggcagccttggcaaca
ctgatgcatgctgctgttccaattcaaagctgcttaaatagtggtggtgtaaataggcat
agtaattcctctgcccagtgcacattggaaaaccttcggccaactttgcaaaagttcccc
acattgtggcgcacgctcattggagcatgtctaggacaagacacaatggccttgctggtc
cctaaagcaaaaactgctttatcagactatcttaattggcgtgatgacatcttcttctct
accagtcatgatacttcacttctacaaatgcttccatgctggtttcctaagcctatacgc
agattgatacagctttatgtccagggtcctcttggatgccaatcattttcagggttccct
acaggggaaactttgctacacagagacattgatttattcataaatgctgatgtacatgct
gagataaatgcaatctcctgggaggcaactgtccaaagacacattgaagaagaactatat
ggtcctttacttgaggaaaatggatttgggcttgagcatcttttgcatcgaggacgagca
ttggctgcttttaaccaaattcttggtcatagagttcaaaatctgaagtcagaagaggaa
tctagtacttcagctcatggacaaactaacattcaatcagatgttcagacacttctttca
gcagtagaacaaagtgaagagactctactttcatctgttttgccagttgccattatgcat
tttgaggattccatgcttgttgcttcatgtgcttttcttttggagctttgtggtttatca
gccaacaagatgcgcattgatattgctgtgctaaaacggatatctttgttctacaaatcg
agtgaaaataatgaaaatctctggcaattatcacctaagggatctgtgtttcatgcaata
tcccatgaaggtgatgtaacagaatctcttgctcgagctttagctgatgaatatttgcac
aaggattctcctgcaactgctactgagactgtaagtaaacaagcttcacgagctcttata
cttgtgttgcaccatttggaaaaggctagccttccacagttggttgatggaaaaacttat
gggtcatggctattaagtggaaatggtgatggaaatgagttaagatctcaacgaaaggct
gctagccagcactggactttggtaacaaatttttgtagattgcaccagcttccgttaagt
accaagtaccttgctgcattagctagagacaatgactggattgaatttttgtctgaagct
cagattggaggatattcatttgatacagtagtccaagtggcatcaaaggagtttagtgat
ccgcgtctccgacttcatatgttaacagttttgagaggaatgcagtcaaagaaaaaggca
agcactgcattgttcttggatacactggagaaaggcagtgaaacaacctttcctgatgaa
aacatgtgtgttccagttgaactcttccaaatattagctgagtgtgaaaagcaaaaatgt
cctggagaggctctcttgaggaaagcaaaagagttgtcctggtcaatattggcaatggtt
gcttcatgtttccttgatgtctctccattgtcatgcctgacagtttggttggaaattact
gcagcaagagaaacttcatccattaaggtgaatgatattgcctcccagattgcagacaat
gttggagcagctgtaaatgctactaatgccctacctgtaggtgacagagtacttacattt
cattacaataggcagagtcctaaacgtcgacggctaataactcttgtttcactagactcc
tctgcttctgcaatatctgacatctgtagctcttctataagtgaagaaatatttgattcc
aaaggtaaaactatggagaatgatagaaaaatagaacattttggatgcattaatgttcca
agtgattcccatgaagggcctgcttctctctcaaagatggttgcagtgctttgtgaacaa
caattgttcttgcccttgctaagggcatttgagatgttccttccatcatgccccttgcta
ccattcatccgtgctcttcaagcattttcgcaaatgcgcctctcagaagcttctgcacat
ttgggctccttttctgcacgaattaaggaagaacctttctacttacaggcaaatgtagga
agagaggcgcagattggggcatcatggattagttctactgcttcaacagctgctgatgct
gtgctttcaacctgtgcatctccttatgaaaaaagatgcttactgcaacttcttgctgct
actgactttggtgatggtggacatactgctgcacactatcgaagggtttattggaaaatt
aatctggcagagcctttacttcgtaaagataatgagttgcatttaggtgatgaaatttca
gatgatgcttccctcttgtctgcactagagaataataggcactgggagcaagcaaggaac
tgggccaagcagttggagcccaatggtgcaccctggaaatctgctatgcatcatgttact
gaatctcaggctgaatctatggtagctgaatggaaggagtttctttgggatgtgccagaa
gagagggttgctttatggagccactgccacacactattcatcagatattccttcccttct
cttcaagctgggttattttttcttaaacatgctgaagctgttgagaaagatcttcctgca
agggagcttcatgaacttttattgctttctctgcaatggctgagtgggatgataagtctt
tccaaccttgtctgtccattgcaacttctacgtgaaattgaaaccaaagtatggctccta
gccgttgagtctgagactcaggtgaagagtgaaggagatttcaattttaccttttctacc
agggagagtggtatcaagaacgaccccagtattattgaccgaactgctagtataatagca
aagatggacaaccatataaatacaatgaggagtagaattgtagaaaaatacgagtccagg
gaaaataaccaaatcccccacaagaatcaagtgatggatgctggtctttcaactactttt
ggtgggaatacaaagacaaaaagaagggccaaaggatacatggcaccaagacgcccacct
cttgaatcagcagataaaagtgctgatactgatgatggctctagtaccaatagtttaaaa
aatgagtttcagttgcaagaggaaaacgtaaaagtggaaatgtctttttctaggtgggaa
gaaagggtcggagcagcagagctagaaagggctgtactttctttattggaatttggacaa
attgctgccgccaagcaactacaatataaattctctcctggacaaataccatctgagttt
agacttgttgatgcagccttgaagcttgctgctatttcaacacctcctagcaatgtatca
gtgccaatgcttgatgaggaagtgcgttcagttatgcactcatatggtataatgaatgat
aagcactatgttgacccgctgcaggttttggagagtttggtgaccatttttattgaaggc
aatgggcgtgggctatgtaagagaataatagcagttataaaagctgcaaacaccttgggc
ctctcattttctgaggcgttcaacaagcaaccaactgaactactacagctgctttcgctt
aaagcacaagattcctttgaggaggccaactttctggttcggactcatccaatgccagcg
gcaagtattgctcaaatacttgcagaatcttttctaaagggtgtgttggctgcacatcgt
ggaggatatatggattcacagaaggaggaagggcctgctccattgctgtggagattttca
gacttcttgaagtgggcagagctttgtccctctgaaccagaaattggacatgctttaatg
cgtttggtgattactggacaagaaataccacatgcatgtgaggttgagcttcttattctg
tcacaccacttctacaaatcatcttcttgccttgatggagttgatgttcttgtggccctt
gctacaactagggttgatgcttatgtcttggagggtgattttccatgtttggctcgcctg
ataactggagttggaaatttttatgctctcaatttcatttttggcattcttatagaaaac
ggtcaattggatcttcttcttcagaagtattctgctgctgcagacacaaacactggcact
gctgaggctgtcagaggatttcgaatggctgttcttacatccttgaagcatttcaaccct
aatgaccttgatgcatttgccatggtctacaatcattttgatatgaaacatgagacggca
gcccttttagagtcacgtgcagagcagtcatgtgagcagtggtttcgctgctacaacaag
gaccagaatgaagacctgttggattccatgcgctacttcattgaagctgctgaagttcac
tcttcgatcgatgctggcaacaaaacacgtaaggattgtgctcaggcttcccttctgtct
cttcaaatacgaatgccagacttccaatggctttatagatcagaaaccaatgctagacga
gcgttagttgagcagtctcgatttcaagaagctctgattgtagctgaagcttataacctg
aaccagccaagtgagtgggctttagtactctggaaccagatgcttaaacctgaagtaatg
gaggagtttgtggctgaatttgtggcagttttacctcttcagccttcaatgctgtttgat
ttagctagattctatagagctgaagttgctgccagaggggaccaatcccatttttctgtc
tggctcacagggggaggattgccagctgaatgggctaaatatttagggagatcattcagg
tgcttactgaagcgaacaagggatttgaagttgcggacgcagttggctacagtggcaact
ggatttggggatgtcattgatgcatgtacagaagaaatggataaggtccctgacaatgca
gcgccactagttctgaggaagggtcatgggggagcttacctccctttaatgtga
DBGET
integrated database retrieval system
