Glycine max (soybean): 100800398
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Entry
100800398 CDS
T01710
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
gmx
Glycine max (soybean)
Pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100800398
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmx01009
]
100800398
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
100800398
Protein phosphatases and associated proteins [BR:
gmx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100800398
Spliceosome [BR:
gmx03041
]
Common components
Common spliceosomal components
SR proteins
100800398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
100800398
NCBI-ProteinID:
XP_014620442
UniProt:
I1JCD2
LinkDB
All DBs
Position
2:4063846..4066660
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AA seq
246 aa
AA seq
DB search
MADSPLARNSRSPSPWKAQSRSRSRSRSRSRSRSRPRQRPRSRSRSRGRSRSPIRGRSRS
PIHGRSEPTNPGDTLYVTGLSSRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVT
MESAEDAERCIKYLNQSVLEGRYITVERSRRKRARTPTPGHYLGLKNTREYGYRGDRGGD
RGRYRDGPDRDNYSRRRSPRRSPYRGGQDYSPQRSPYGGRSRRERSRSLPYSPHGSPDRK
YARGSR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctcccctcgcaaggaactcaaggtcaccttccccatggaaagctcagtcg
agatcgagatctaggtcaaggtcgagatctaggtcgaggtctaggcctagacaaaggcca
agatcgcgttctagaagtcgtggcaggtcaaggtcaccaattcgtggaaggtcaaggtca
ccaattcatggaaggtctgaacctacaaatcctggtgacacactttatgtaactggtcta
tcttcgagggtcaccgaaagagacctagaggagcatttctccaaggaaggaaaggtttct
tcatgttttcttgtggtggagccccgtacacggatttctcgtggttttgcttttgttaca
atggaatctgctgaagatgcggagcgctgtatcaagtatctcaatcaatcagttttagag
ggtcgttacatcactgttgagcggtcacgaagaaaacgtgcaagaactccaaccccaggg
cactatcttggactgaaaaacacaagggagtatggctatcgtggtgaccgaggtggtgac
cggggaaggtatcgcgatggtcctgaccgtgacaattactcacgtcgtaggtctccgagg
cgttcaccatacagaggtggccaagattattctccccagcgctcaccctatggtggaagg
tctaggagggaaaggtctaggtcacttccttattctccacatggtagcccagacaggaag
tatgctcgcggatctaggtga
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