Glycine max (soybean): 100800861
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Entry
100800861 CDS
T01710
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8 isoform X1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100800861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100800861
03036 Chromosome and associated proteins [BR:
gmx03036
]
100800861
Enzymes [BR:
gmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100800861
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100800861
mRNA degradation factors
5'-3' decay
Decapping complex
100800861
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100800861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
TFIIA
CMS1
Peptidase_C58
Motif
Other DBs
NCBI-GeneID:
100800861
NCBI-ProteinID:
XP_003528862
UniProt:
I1KID0
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All DBs
Position
7:6462568..6469796
Genome browser
AA seq
503 aa
AA seq
DB search
MNHNNSNNNRARYPPGMGLGRGGFNPNLSQNPNQNQNHHAFQARPPYHQQQQAQYVQRHL
LQQQQQQQQQQQQQQQQWLRRDANAVDEVEKTVQSEAVDSSSQDWKARLKIPPADTRYKT
EDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKT
AAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDD
ILRLYQPVHLLVGTPGRILDLTKKGVCILKDCAMLVMDEADKLLSPEFQPSIEQLIHFLP
TTRQILMFSATFPVTVKDFKDRYLQKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTL
FSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNL
VCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYR
IEQELGTEIKQIPPQIDQAIYCR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacaacaacagcaacaacaatagagcgaggtaccctcctgggatgggacttggg
cgcgggggtttcaatccgaacctgagccagaacccgaaccagaaccagaatcatcacgcg
ttccaggctcggccgccgtaccaccaacagcaacaggcgcaatatgtgcagaggcatttg
ttgcagcagcagcagcagcagcagcaacagcagcaacagcagcagcagcagtggctgaga
agggatgccaacgccgtcgacgaggttgagaagaccgtgcagtctgaagccgtggattcg
agttcccaagattggaaagcaagactaaagattccacctgctgatactcgctataagaca
gaggatgtaacggcaactaaaggaaatgagtttgaggattactttttgaagcgtgagctg
ctaatgggaatatatgagaagggttttgaaaggccttctcccatccaagaagaaagcatt
ccaattgctcttactggtagtgacattcttgctagggctaaaaatggaactggcaaaaca
gctgcattttgcattcctgcattggaaaaaattgatcaggacaataatgttattcaagtt
gttatactggtcccaacccgagaattggcattgcaaacttctcaagtgtgcaaagagctt
ggaaagcacttgaaaattcaagttatggttacaacaggtggtaccagcctgaaagatgat
atactgcgcttatatcaaccggttcatttactagttggaactccaggaagaatattagat
cttaccaagaaaggtgtttgtattctgaaagattgcgctatgcttgttatggatgaggcc
gataagcttctgtccccagagtttcaaccatctatagagcagctgattcattttcttcct
acaacccgtcaaatcttgatgttttcagccacatttcctgttactgtaaaggatttcaaa
gataggtatcttcaaaagccttatgtcatcaatcttatggatgagctaactttgaagggt
attacacaattttatgcattcgtggaagagagacagaaagtccactgcctaaatactcta
ttttctaagctgcaaataaaccagtctatcatcttctgcaattcagtgaatcgggttgaa
ctacttgccaagaaaatcacggaacttgggtattcatgtttctacattcatgcaaagatg
ttgcaagaccatcgtaacagagtgtttcatgacttccgcaatggtgcatgtcgaaatctt
gtttgtactgatctttttactagaggaatagacattcaagcagttaatgttgttattaat
tttgattttccaaagaatgcagagacttatttgcacagggttggtcgttcagggaggttt
gggcaccttggtttagcagtgaacttgattacctatgaggatcgctttaatttatatagg
attgaacaagaacttggaactgaaataaagcagattcccccacaaattgatcaggcaatt
tattgtcggtga
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