Glycine max (soybean): 100800927
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Entry
100800927 CDS
T01710
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
gmx
Glycine max (soybean)
Pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100800927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
100800927
Spliceosome [BR:
gmx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100800927
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_DCAF4
WDR90_beta-prop_4th
PRP4
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
WD_LRWD1
Beta-prop_SCAP
WD40_like
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
100800927
NCBI-ProteinID:
XP_003519096
UniProt:
I1JGD6
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All DBs
Position
2:37672248..37677222
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AA seq
570 aa
AA seq
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MEVEKENTTSTITAEPSVSASDGQDPVSSVNASLPDPMQPVIPQVIAPFVVPSLAPIPAI
PPPRPLAPLPVRSPVIRPPVPQNGEVGSSDSDSDNDDSNARINQGGGEYEISEESRLVRE
RQEKAMQELMMKRRAAALAVPTNDMAVRARLRHLGEAITLFGEREMERRDRLRMIMAKLD
AEGQLEKLMKAHEEEEAVASASKDEAEEELQYPFYTEGSKALLDSRIYIAKYSLARAALR
IQRAQRRRDDPDEDMDAEMDWALKQAGNLSLEFSEIGDDRPLSGCSFSRDGKWLATCSLT
GASKLWSMPKIKKHSIFKGHTERATDVAYSPVHDHLATASADRTAKYWNQGSLLKTFEGH
LDRLARIAFHPSGKYLGTASFDKTWRLWDIETGDELLLQEGHSRSVYGLAFHNDGSLAAS
CGLDSLARVWDLRTGRSILALEGHVKPVLSISFSPNGYHLATGGEDNTCRIWDLRKKKSF
YTIPAHSNLISQVKFEPHEGYFLVTASYDMTAKVWSGRDFKPVKTLSGHEAKVTSVDVLG
DGGSIVTVSHDRTIKLWSSNPTDEQAMDVD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagagaaggaaaataccacatctactattactgcagaaccctcagtatctgcc
tctgatggtcaagatcctgtttcttctgttaatgcatctctacccgatcctatgcaacct
gttattccacaggttattgcaccttttgttgtaccttctttagctccaattcctgcaatt
cctccgcctcgcccactggcaccgcttccagttcggtcacctgtcattaggccacctgtg
ccacaaaatggcgaggttggatcaagtgactctgattcagacaatgatgattcaaatgca
agaattaaccaagggggtggggagtatgagatatcggaagagagtagactggtgagagag
cggcaggaaaaggcaatgcaggagctcatgatgaagaggcgtgctgctgctcttgctgtt
cctacgaatgatatggccgtgcgagctcgccttcgacatcttggtgaagctataactctg
tttggtgagagggagatggagagacgggacagattgcggatgattatggcgaagctggat
gcagaaggtcagctggagaagctgatgaaagctcatgaggaagaagaggctgtggcttct
gcttcgaaagatgaggctgaggaagaactgcagtatcctttttacactgaagggtcaaag
gctctcctggattccagaatttatattgctaaatattctttggcaagggcagcattacgg
attcaacgtgcacagaggagaagggatgatccagatgaagatatggatgcagagatggat
tgggcattgaagcaggctgggaatttgagtcttgaattcagtgaaattggagatgatcga
ccactttctggttgctccttctcaagggatggaaaatggcttgctacctgttctctgaca
ggagcttccaagttgtggagcatgcccaaaataaaaaagcattccatcttcaagggtcac
acagagcgtgctactgatgttgcttattctcctgttcatgatcatttagcaactgcctct
gctgatcgaacagcaaagtattggaatcaaggatctctactgaagacatttgagggtcat
ctagaccgtcttgcccgcattgccttccatccatcagggaagtacctgggtactgctagc
tttgacaagacatggagattatgggacatagaaacaggagacgagttgcttcttcaagaa
ggccatagtagaagtgtatatggtctggctttccacaatgatggatcattagctgcatct
tgtggactagactctctggctcgtgtttgggacctccgaactggaagaagtattcttgca
ctggaaggtcatgtcaaaccggttctcagcatcagtttttcacccaatggatatcatcta
gccacgggtggtgaagacaacacttgtcggatttgggatttgaggaagaagaaatccttt
tatactattcctgcccactctaatttaatatcacaagttaaatttgagccacacgaaggt
tactttttggtaactgcctcatatgacatgactgctaaggtttggtcaggccgtgacttt
aagcctgtgaagacactatctgggcatgaagctaaagttacttctgtggatgttcttggt
gatggcgggtctattgttactgtctcacatgatcgcaccataaagctgtggtccagcaat
ccgactgatgaacaagctatggatgttgactaa
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