Glycine max (soybean): 100800982
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Entry
100800982 CDS
T01710
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
gmx
Glycine max (soybean)
Pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100800982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
100800982
Spliceosome [BR:
gmx03041
]
Complex A
Other components
Complex A specific factors
100800982
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
zf-CCHC
KH_12
KH_PNO1_2nd
RRM_7
PHD_4
Motif
Other DBs
NCBI-GeneID:
100800982
NCBI-ProteinID:
XP_003539505
UniProt:
I1LNT7
LinkDB
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Position
12:438476..443147
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AA seq
780 aa
AA seq
DB search
MDAVDSTPNPPPLPTYDPSEYHNPPQHQSETGQNGNGTNLGKPSENGSQVAADNNGLNPQ
ISKPLLSEGLTRSGTDRDQSGGEEETTSKRRRRSRWDPQPESNEQSGGDSGTGPKKRKSR
WADDDPKPVIQLPDFMGGIEFDPEIQALNSRLLEISRMLQSGLPLDDRPEGARSPSPEPI
YDNMGIRINTREYRARERLQKERQEIISQIIKKNPAFKPPVDYRPPKLQKKLYIPMKEYP
GYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQQKRDLKPDPSENEDLHVLV
EAETPESLEAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNGTIRDEEYCRLCGEPGHRQ
YACPTRTSTFKSEVVCKHCGDGGHPSIDCPVKGATGKKMDDEYQNFLAELGGSVPESATK
QTSTLAIGAGTSGSNPPWANNSGTAGSAPQAGLGAAAIKKEIDDTNLYIGYLPPTLDDDG
LIQLFQQFGEIVMAKVIKDRMSGLSKGYGFVKYADITMANNAILAMNGYRLEGRTIAVRV
AGKPPQPVVPPGPPASAVPTYPVPSQPLGAYPSQQYAAGGPIGTAPPGSYGGTPVPWGPP
VPPPYAPYAPPPPGSTMYPPMQGQPMPPYGVQYPPPVPTGPPGAPSQPATSSEVQQSYPP
GVQSDNSTSTQSIPANVYGNSGPPMPPQPTYPASYGYPPYYNAVPPPPPPSAPMPVSTSD
QSHNIANVPWASNSLVPPPASSADNQSQSIGNVPRAANPSVPPPASSADSEYEKFMAEMK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcgactcaaccccaaatccccctcccctccctacctacgatccatcagag
tatcacaacccgccgcaacatcaatcggaaaccgggcaaaacggtaacggcaccaacctc
ggaaaaccatcggagaacggcagtcaggtcgctgccgacaacaacggcttgaatcctcag
atttcgaagccattgctatccgaaggattgacgcggagcggcaccgacagggatcaatcc
ggcggcgaggaggagaccaccagcaagcgccgccgccgcagtcggtgggacccgcagccg
gaatcgaatgaacagagcggcggcgattcggggaccggaccgaagaagaggaagtctcgt
tgggccgatgacgaccctaaaccggtgattcagcttcctgatttcatgggcggtattgaa
ttcgatcccgagattcaagctttgaatagtaggcttcttgagattagtcgaatgttacag
tcaggtttacccttagatgatcgccctgaaggtgctcgttccccttcgcctgaacctata
tatgataacatgggcattagaattaacactagggaatatcgtgcgcgtgagagattgcaa
aaggagaggcaggaaattatatctcagattataaagaagaatcctgcgtttaagccacct
gtggattataggccgcccaagcttcagaagaagctttatataccgatgaaggaataccct
ggttacaatttcattggacttattattggtcctcgaggtaacacccagaagcggatggag
aaagaaaccggtgctaaaattgtgattcgtggtaagggatcggtgaaagagggtaggctt
cagcagaagagggatttgaaacctgacccttcggagaatgaggatttgcatgtgttagta
gaggctgagacgccggagtcacttgaggctgctgcgggtatggtggagaagctcttgcag
cctgtggatgaggtattgaatgagcacaagaggcaacagcttagggagcttgctgcgttg
aatgggacgatcagggacgaggagtattgcaggttgtgtggtgagcctggtcatcgccaa
tatgcatgtcctactaggacttcaacgtttaagagtgaagttgtgtgtaagcattgtggg
gatggtggtcatccaagcatagattgtccggtgaagggtgcgactgggaagaagatggat
gatgagtatcagaatttccttgcagagttgggaggttcggttcctgaatctgcaacaaag
caaaccagtacattggcaattggtgcaggcacttctggaagcaatcctccttgggctaac
aattctggtactgcaggcagtgcacctcaagctggcttaggggctgctgcaattaagaag
gaaattgatgatacgaatttgtacatagggtacttgccgcccactcttgatgacgatggc
ctgatccaattatttcaacaatttggtgagattgttatggcaaaagttatcaaggatcga
atgtcgggtttaagtaaaggatatggttttgtgaagtatgctgatattacaatggcaaac
aatgcaatcttggccatgaacggttatcgccttgagggtcgaacaattgcagtgagagtt
gctggtaagcctcctcagcctgttgtacctcctggaccaccggcatctgctgtgccaact
tatcctgttccaagtcagccacttggtgcatatccatcccaacagtatgctgccggtggc
cccattgggactgctcctcctgggagttacggtggtaccccagtgccatggggaccccct
gttcctcctccatatgctccctatgctcctcctccacctgggtcaactatgtatccacct
atgcaaggtcaacctatgcctccttatggggttcaatatccccctcctgtgccgactggc
cctcccggtgccccatcccagcctgcaacttctagtgaagtgcagcagagttaccctccc
ggagtgcagtctgacaacagtacctctactcagtctataccagctaatgtatatggtaat
tcgggacctccaatgccacctcaacctacatatcctgcatcttatggatatccaccttac
tataatgcagttcctccgccacctcccccttctgcccccatgcctgtttcaacttcagat
caatcccacaacattgcaaatgtgccttgggccagtaattctctagtcccacctcctgct
tcatcggcagacaatcaatcccagagcattggaaatgtgcctagggccgcaaatccatca
gtgcctcctcctgcttcatcagctgattcagagtatgaaaagttcatggcagagatgaaa
tga
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