KEGG   Glycine max (soybean): 100801159
Entry
100801159         CDS       T01710                                 
Symbol
HDA3
Name
(RefSeq) histone deacetylase 6 isoform X2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
gmx  Glycine max (soybean)
Pathway
gmx03082  ATP-dependent chromatin remodeling
gmx03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100801159 (HDA3)
   03083 Polycomb repressive complex
    100801159 (HDA3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gmx03036]
    100801159 (HDA3)
Enzymes [BR:gmx01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     100801159 (HDA3)
Chromosome and associated proteins [BR:gmx03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     100801159 (HDA3)
   HDAC complexes
    Sin3A-HDAC complex
     100801159 (HDA3)
    BRAF-HDAC complex
     100801159 (HDA3)
    REST complex
     100801159 (HDA3)
    SHIP complex
     100801159 (HDA3)
    MiDAC complex
     100801159 (HDA3)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     100801159 (HDA3)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100801159 (HDA3)
  Chromatin remodeling factors
   NuRD complex
    100801159 (HDA3)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 100801159
NCBI-ProteinID: XP_003523097
UniProt: I1JXA8
LinkDB
Position
4:complement(44552428..44557521)
AA seq 464 aa
MARGERAETESGVSLPSVGTDAKKRRVTYFYEPCIGDYYYGQGHPMKPHRIRMAHNLIVH
YGLHRRMQVNRPFPAAEADIGRFHADDYVDFLSTVSPQILSENSHSHYRQLKRFNVGEDC
PVFDGLFDFCRASAGGSIGAAVRLNREDADVAINWAGGLHHAKKAEASGFCYVNDIVLGI
LELLKVHRRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGVGAGK
NYSLNVPLNDGLDDETFRGLFRPIIQKVMDVYQPDAVVLQCGADSLSGDRLGCFNLTVKG
HADCLRFLRSFNVPLMVLGGGGYTVRNVARCWCYETAVAVGVEPSPKLPYNEYYEYFGPD
YNLHVEPSTMENLNTPRDLEKIRNTLLEQLSRLPHAPSAPFQTTPSVIEVPEEEEEDMDV
RPKRRIWSGEDFDSDHDDDMASSKNSDLTAQTRSVADDMDEDKD
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggcgagaggggagagagcggagacagagagtggcgtttcgttgccctcggtgggcacg
gacgcgaagaagcggagagtaacgtacttctacgagccgtgcatcggcgactactactac
gggcaagggcatccgatgaagcctcaccgcattcgcatggcccacaacctcatcgttcac
tacggcctccaccgccgcatgcaggtcaaccgccccttccccgcggcggaggccgacatc
ggccgcttccacgccgacgactacgtcgacttcctctccaccgtctcgccgcaaatcctc
tccgagaattcccactcccactaccgtcagctcaagcgcttcaacgtcggcgaggactgc
cccgtcttcgacggcctcttcgacttctgccgcgcctccgccggcggctccatcggcgcc
gccgtccgcctcaaccgcgaagacgccgacgtcgccatcaattgggccggcggcctgcac
cacgccaagaaggccgaggcctccgggttttgctatgttaacgacattgttctcggcatt
ctagaacttctcaaagttcataggcgtgtgctgtatattgatattgatgttcaccatgga
gatggcgttgaggaggcattttacactactgatagggtgatgacagtgtcatttcataag
tttggggattttttcccaggaactgggcacattaaagacattggggtgggtgctggaaag
aattattctctaaacgtcccactcaatgatggattggatgatgagactttccgtggtctg
tttcgccccatcattcaaaaagtcatggatgtttatcaaccggatgcagttgttcttcaa
tgtggagctgactcgttgtctggtgatcggttgggttgcttcaacttgactgtgaagggc
catgcagattgccttcgtttccttagatcattcaatgtccctctaatggtcttgggtggg
ggaggatatacggttcgcaatgttgctcgttgttggtgttatgagactgcagtggcagta
ggagtggagcctagtcctaagttgccttacaatgaatattatgaatattttggcccggac
tataatcttcatgttgagccatccacaatggaaaacctaaacacacccagggatctggaa
aaaattcggaatacattactggaacaactttccaggcttccccatgcacccagtgcacct
tttcaaacaacaccatcggtcatcgaagttccagaagaggaagaggaggacatggatgta
aggccaaaacgtcgtatatggagtggtgaagattttgattcggatcatgatgatgacatg
gctagttcaaagaactctgatttaactgcacaaacgaggtctgttgcagatgacatggac
gaagataaagattaa

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