KEGG   Glycine max (soybean): 100801229
Entry
100801229         CDS       T01710                                 
Name
(RefSeq) pinin isoform X1
  KO
K13114  pinin
Organism
gmx  Glycine max (soybean)
Pathway
gmx03013  Nucleocytoplasmic transport
gmx03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100801229
   03015 mRNA surveillance pathway
    100801229
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmx03019]
    100801229
   03041 Spliceosome [BR:gmx03041]
    100801229
Messenger RNA biogenesis [BR:gmx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100801229
Spliceosome [BR:gmx03041]
 Complex C
  Other components
   EJC/TREX
    100801229
SSDB
Motif
Pfam: Pinin_SDK_memA Patatin
Other DBs
NCBI-GeneID: 100801229
NCBI-ProteinID: XP_003547561
UniProt: I1MDR5
LinkDB
Position
15:3829486..3833244
AA seq 426 aa
MGSTAVEKTEEELRNEIDELLRQQREITERLRDPRGLRRGSLAGPALPSNGARQRPFIRP
VTGDRNDSEDQPPAKRRLSSAVVKVDDGELPEDAGAGQDGKTKDSANEAVNGTAAVVQND
SNPFNSHQTVWSKRDNNQRTSKASDIPTTEHVPRVLPKNEDPSLVNRNKRMLGQLLGTLE
KFRKEDKQLSGTEAYMRRSSSLQRAEQRAREESERLRKEEREQIAEKRRRDLTLRARVAA
KTEEKKLELLFLQWTEHHKRLSNFIRTKAEPPIYYLPNKPLDEDPTLLEKSKEEAFLEWK
NARREEVSEYQKQIGEQYLANVEKELERWQNARNARKVNNDQNLQETMDKELDTHRLEHG
PKKRKIPDENNNDDDDDVEDINVGEDDMMDDELDDDSSRRIDETTKTEAGSASSDPAADA
DNAGGK
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggggagcacggcggtggagaagacggaggaagaactccgcaacgagatcgatgagctt
cttcgccaacagcgcgagattacggagaggcttcgagatcctcgaggtcttcgcagaggt
tccttggcgggtcctgctctcccctctaacggtgctcgccaacgaccctttattcgtcct
gttactggagacaggaatgattctgaagatcaacctcctgctaaacgtcgactttcatct
gctgtcgttaaggtggatgatggggagttgcctgaagatgctggtgcaggacaggatggg
aagacaaaggattcagcgaacgaagctgtcaatgggactgctgcagtggtccagaatgat
agcaaccctttcaattctcaccaaactgtatggtctaagagagataacaatcaaagaact
tcaaaggcttctgacattcctactacggaacatgttccaagggtattgccaaagaacgag
gatccaagtttggttaataggaacaaaagaatgttgggccagcttttgggaactctcgag
aaattcagaaaggaagacaagcaactctcaggaacagaggcatatatgcgaagatctagt
tccttgcaaagagctgagcaaagggcacgtgaagaaagtgaaaggctcaggaaagaagag
cgtgaacagattgctgaaaaacgaaggagagacttgactcttagggctcgtgtggctgct
aagacagaagaaaagaaattggagctgctgtttcttcagtggactgagcatcataaaaga
ctaagcaattttataaggactaaagcagaacctccaatctactatttgcctaacaagccc
ttggatgaagatcctacattacttgagaagagcaaagaagaggcttttctagaatggaag
aatgcaagaagagaggaagtgtccgagtatcagaaacagattggggagcagtatcttgcc
aatgttgagaaggaattggagagatggcagaatgcaaggaacgcaaggaaagttaacaat
gaccagaatttacaggagacaatggacaaagagttggatactcataggctggagcatggt
cccaagaaaagaaagatccctgacgaaaacaataatgacgacgatgatgatgtggaagat
ataaatgtgggagaggatgacatgatggatgatgaattagacgatgattctagtaggagg
attgatgaaacaaccaagacggaagcaggtagtgccagttcagatcctgcagctgatgct
gataatgcgggagggaagtga

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