Glycine max (soybean): 100801229
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Entry
100801229 CDS
T01710
Name
(RefSeq) pinin isoform X1
KO
K13114
pinin
Organism
gmx
Glycine max (soybean)
Pathway
gmx03013
Nucleocytoplasmic transport
gmx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100801229
03015 mRNA surveillance pathway
100801229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100801229
03041 Spliceosome [BR:
gmx03041
]
100801229
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100801229
Spliceosome [BR:
gmx03041
]
Complex C
Other components
EJC/TREX
100801229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Patatin
Motif
Other DBs
NCBI-GeneID:
100801229
NCBI-ProteinID:
XP_003547561
UniProt:
I1MDR5
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All DBs
Position
15:3829486..3833244
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AA seq
426 aa
AA seq
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MGSTAVEKTEEELRNEIDELLRQQREITERLRDPRGLRRGSLAGPALPSNGARQRPFIRP
VTGDRNDSEDQPPAKRRLSSAVVKVDDGELPEDAGAGQDGKTKDSANEAVNGTAAVVQND
SNPFNSHQTVWSKRDNNQRTSKASDIPTTEHVPRVLPKNEDPSLVNRNKRMLGQLLGTLE
KFRKEDKQLSGTEAYMRRSSSLQRAEQRAREESERLRKEEREQIAEKRRRDLTLRARVAA
KTEEKKLELLFLQWTEHHKRLSNFIRTKAEPPIYYLPNKPLDEDPTLLEKSKEEAFLEWK
NARREEVSEYQKQIGEQYLANVEKELERWQNARNARKVNNDQNLQETMDKELDTHRLEHG
PKKRKIPDENNNDDDDDVEDINVGEDDMMDDELDDDSSRRIDETTKTEAGSASSDPAADA
DNAGGK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggggagcacggcggtggagaagacggaggaagaactccgcaacgagatcgatgagctt
cttcgccaacagcgcgagattacggagaggcttcgagatcctcgaggtcttcgcagaggt
tccttggcgggtcctgctctcccctctaacggtgctcgccaacgaccctttattcgtcct
gttactggagacaggaatgattctgaagatcaacctcctgctaaacgtcgactttcatct
gctgtcgttaaggtggatgatggggagttgcctgaagatgctggtgcaggacaggatggg
aagacaaaggattcagcgaacgaagctgtcaatgggactgctgcagtggtccagaatgat
agcaaccctttcaattctcaccaaactgtatggtctaagagagataacaatcaaagaact
tcaaaggcttctgacattcctactacggaacatgttccaagggtattgccaaagaacgag
gatccaagtttggttaataggaacaaaagaatgttgggccagcttttgggaactctcgag
aaattcagaaaggaagacaagcaactctcaggaacagaggcatatatgcgaagatctagt
tccttgcaaagagctgagcaaagggcacgtgaagaaagtgaaaggctcaggaaagaagag
cgtgaacagattgctgaaaaacgaaggagagacttgactcttagggctcgtgtggctgct
aagacagaagaaaagaaattggagctgctgtttcttcagtggactgagcatcataaaaga
ctaagcaattttataaggactaaagcagaacctccaatctactatttgcctaacaagccc
ttggatgaagatcctacattacttgagaagagcaaagaagaggcttttctagaatggaag
aatgcaagaagagaggaagtgtccgagtatcagaaacagattggggagcagtatcttgcc
aatgttgagaaggaattggagagatggcagaatgcaaggaacgcaaggaaagttaacaat
gaccagaatttacaggagacaatggacaaagagttggatactcataggctggagcatggt
cccaagaaaagaaagatccctgacgaaaacaataatgacgacgatgatgatgtggaagat
ataaatgtgggagaggatgacatgatggatgatgaattagacgatgattctagtaggagg
attgatgaaacaaccaagacggaagcaggtagtgccagttcagatcctgcagctgatgct
gataatgcgggagggaagtga
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