Glycine max (soybean): 100801958
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Entry
100801958 CDS
T01710
Name
(RefSeq) pinin isoform X1
KO
K13114
pinin
Organism
gmx
Glycine max (soybean)
Pathway
gmx03013
Nucleocytoplasmic transport
gmx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100801958
03015 mRNA surveillance pathway
100801958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100801958
03041 Spliceosome [BR:
gmx03041
]
100801958
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100801958
Spliceosome [BR:
gmx03041
]
Complex C
Other components
EJC/TREX
100801958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
100801958
NCBI-ProteinID:
XP_014634565
UniProt:
I1KUJ2
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Position
8:complement(14839956..14843883)
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AA seq
424 aa
AA seq
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MAVEKTEQELRNEIDELLRQQREISERLRDPRGLRRGALPGPPALRTNGVRQRPFIRPGD
RNDSEDQPPSKRRLSSAVVKVDDGDLPEDADAGQEDGKTKDLTNEAVNGTAALVQNDSNP
FNSHQSGWSKRDISNQKTSKASDVPNTDHVPRVLPKNEDPSLVNRNKRMLGQLLGTLEKF
RKEDMQLSGTEAYMRRSNSLQRAEQRAREESERLRKEEREQIAEKRRRDLTLRARVAAKT
EEKKLELLFLQWSEHRKRLSNFIRTKAEPPIYYLPNKPLDEDPTLLEKRKEEAFLEWKNA
RREEVSEYQKQIGEQYLANVEKELERWQNARNARKVNNDQNLQETMDKELDTHRLEHGPK
KRKIPDGNNNEDDDDVEDINVGEDDMMDDELDDDSGRRIDDTTKTEAGNASTDPVADGEN
AEGK
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggagaagacggagcaagaactccgcaacgagatcgatgagcttcttcgccaa
cagcgcgagatttcggaaaggcttcgagatcctcgaggtcttcgcagaggtgccttgccg
ggtcctcctgctctccgcactaacggtgttcgccaacgaccctttattcgccctggagac
aggaacgattctgaagatcaacctccttccaagcgtcgactttcatctgccgtcgttaag
gtggatgatggggacttgcctgaagatgctgatgcaggacaagaagatggaaagacaaag
gatttgactaatgaagctgtcaatgggacagctgcactggtccagaatgatagcaaccct
ttcaattctcaccaaagtggatggtctaagagagatatcagcaatcaaaaaacttcaaag
gcttctgacgttcctaatacagatcatgttccaagggtattgcctaagaatgaggatcca
agtttggttaataggaacaaaagaatgttgggccagcttttgggaactctcgagaaattc
cgaaaggaagacatgcaactctcaggaacagaggcatatatgcgaagatctaattccttg
caaagagctgagcaaagggctcgtgaagaaagtgaaaggcttaggaaagaagagcgtgaa
cagattgctgaaaaacgaaggagagacttgactctcagggctcgtgtggctgctaagaca
gaagaaaagaaattggagctgctgtttcttcagtggagtgagcatcgtaaaagactaagc
aattttataaggactaaagcagagcctccaatctactatttgcctaacaagcccttggat
gaagatcctacattacttgagaagcgcaaagaagaggctttccttgaatggaagaatgct
agaagagaggaagtgtctgagtatcagaaacagattggggagcagtatcttgccaatgtt
gagaaggaattggagagatggcagaatgcaagaaatgcaaggaaagtaaacaatgaccaa
aatttgcaggagacaatggacaaagagttggatactcataggctggagcatggccccaag
aaaagaaagatcccagacggaaacaataatgaagatgatgatgatgtggaagatataaat
gtgggagaggatgacatgatggatgatgaattagatgatgattctggtaggaggattgat
gatacaactaagacggaagcaggtaatgccagcacagatcctgtggctgatggcgagaat
gcggaagggaagtga
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