Glycine max (soybean): 100802224
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Entry
100802224 CDS
T01710
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
gmx
Glycine max (soybean)
Pathway
gmx04142
Lysosome
gmx04144
Endocytosis
gmx05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100802224
04142 Lysosome
100802224
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
100802224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmx04131
]
100802224
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmx04147
]
100802224
Membrane trafficking [BR:
gmx04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
100802224
Exosome [BR:
gmx04147
]
Exosomal proteins
Proteins found in most exosomes
100802224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
100802224
NCBI-ProteinID:
XP_003538472
UniProt:
I1LMS9
LinkDB
All DBs
Position
11:37554208..37566341
Genome browser
AA seq
1700 aa
AA seq
DB search
MAAANAPIAMRETLTLPTIGINPQFITFTHVTMESDKYICVRETAPQNSVVIIDMNMPNQ
PLRRPITADSALMNPNSRILALKAQLQGTTQDHLQIFNIEMKAKMKSYQMPEQVVFWKWI
TPKLLGIVTQTSVYHWSIEGDSEPVKMFERTANLANNQIINYRCDPSEKWLVLIGIVPGS
PERPQLVKGNMQLFSVEQQRSQALEAHAASFAQFKVPGNENPSTLISFATKTLNAGQIIS
KLHVIELGAQPGKPSFSKKQADLFFPPDFADDFPVAMQISHKYSLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTSEATSVGGFYAINRRGQVLLATVNEQTIVNFVSGQLNNLEL
AVNLAKRGNLPGAEKLVVERFHELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGYLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRSLQHYTELPDIKRVIVNTHAI
EPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVDACIKLFEQFR
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESSFYDPEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTSNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWEKVLNPDNTYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEMAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIHSIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLDVIRAAEDGNVYHDLVRYLLMVRQKTKEPKVDSELIYAYAKIDRLSDI
EEFILMPNVANLQNVGDQLYDEELYEAAKIIFAFISNWAKLAVTLVKLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRYEKLMEHIKLFATRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPEAWDHMQFKDVVVKVANVELYYKAVHFYLQEHPDLINDVLNVL
ALRVDHARVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGD
RELAEELLVYFIDQGKKECFASCLFVCYDLIRADIALELAWMNNMIDFAFPYLLQFIREY
TGKVDELVKDKIEAQNQVKAKEQEEKEVIAQQNMYAQLLPLALPAPPMPGMGGGFAPPPP
MGGLGMPPMPPFGMPPMGSY
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccaacgctccgatcgccatgagagaaactctcaccttgccgaccattggc
attaatccgcagttcatcacgttcacgcatgtgacaatggagtccgataagtatatttgc
gttcgagaaacggctccgcagaatagtgtggttatcattgatatgaacatgccgaatcag
cctttgaggaggcctattaccgcagattccgctcttatgaatccgaattccagaatcctt
gctttgaaagctcaactccaaggaacaactcaagatcacctacaaatttttaacattgaa
atgaaagcaaagatgaaatcttatcagatgcctgagcaggtggtcttttggaagtggatt
acccccaagttgttgggtattgtaacacagacctctgtataccattggtcaattgaaggt
gactctgaacctgtaaagatgtttgagagaacagcgaatttggcaaacaaccaaataatt
aattatagatgtgatccttctgaaaaatggttggtcttgattggtattgttccaggttcc
cctgagaggccacaattggttaaaggaaacatgcaactcttctctgtggaacaacagcgg
agccaggctcttgaagcacatgctgcatcatttgctcaattcaaagttcctgggaatgaa
aatccatctactttgatttcttttgccactaaaacacttaatgctggtcaaattatatcc
aagttgcatgttattgagctgggtgcacagccagggaagccatcattttccaagaaacaa
gcagatcttttctttcctccagattttgctgatgattttccagttgccatgcagatatcc
cacaaatacagtttgatttatgtgattaccaaacttggtctcctatttgtctacgatttg
gagacagctacagctgtatataggaacagaattagtccagatcctatatttttgacatca
gaagctacgtcagttggaggcttttatgccattaataggagaggccaggtgttattggct
actgttaatgagcaaacaatcgtgaattttgtcagtggtcagctaaacaatttggagcta
gcagttaatctcgccaagagaggaaatcttcctggtgctgagaaactggtggtagaacgt
ttccatgaactgtttgcccaaaccaagtataaagaagcagctgagcttgctgctgagtct
ccacaaggaatccttcgcacacctgatacagttgccaaatttcagagtgttcctgtgcaa
gctgggcaaactcctccactattgcagtattttggaacacttctaacaagaggaaagctg
aatgcctttgagtcattggaattgtcacggctggttgtgaaccagaacaagaaaaatctt
ttggagaattggttggcagaggacaagcttgaatgcagtgaggagctaggagatcttgta
aagactgtggataatgatcttgccttaaaaatatacatcaaagccagagctactccaaaa
gttgttgctgcttttgctgagagaagggagtttgacaagattctgatatactctaagcag
gttgggtacacgcctgactatctcttccttttgcaaacaattctccggacagatcctcag
ggtgctgttaattttgcattaatgatgtcgcaaatggagggaggttgcccagttgattac
aacaccataactgatctgtttcttcagagaaatctgatccgtgaggcaacagcttttctg
ctagatgttctgaaaccaaatctaccagaacatgggtaccttcaaactaaggtgttggag
ataaatctagttactttcccaaatgttgctgatgcaattttggctaatggaatgttcagc
cattatgaccgtcctcgtattgctcaactttgtgaaaaagctggtctttatgtgcgatct
ttgcaacattacacagagttgccagatataaaacgtgtaattgtaaatacacatgcaatt
gagccacagtcactcgttgaattttttggtactctgtcacgagaatgggcattagagtgc
atgaaagatctattgctggtcaatcttagaggcaacctacagattattgtgcaggttgct
aaagaatattgtgaacaattgggcgttgatgcttgcataaagctttttgagcagttcagg
tcatatgaagggctgtattttttcctgggatcatatttgagctccagtgaggatcctgac
attcactttaagtacattgaagcagctgcaaagactggacaaatcaaagaggttgagcgt
gtgactagagaatcaagtttctatgatcctgagaaaacaaagaactttctaatggaagct
aagcttccagacgcacgacctctaattaatgtttgtgaccggtttggatttgttccggat
ctaacacactatctatacacaagcaacatgcttcgttacattgaaggttatgttcagaag
gtgaacccagggaatgctcctttagtcgttgggcagcttttagatgatgaatgcccagaa
gattttatcaaaggcttgattctctctgttcgttccttactgccagtggagcctcttgtg
gaggagtgtgaaaagaggaatcggcttcgtttgctcacacagtttttggaacatcttgta
agtgagggaagccaggatgtacatgttcacaatgcactgggtaaaatcatcattgatagc
aacaacaatccagaacattttctcactaccaacccatactatgattctcgagttgtgggc
aaatattgtgagaaacgtgatcccaccttggcagttgtagcttataggcggggacaatgt
gacgacgaacttatcaatgtgacaaacaaaaattctttgttcaaactacaagcaagatat
gttgttgagaggatggatggtgatctttgggagaaagttcttaaccctgataatacctac
agaaggcaacttattgatcaggttgtatctacagctcttcctgaaagcaagagccccgaa
caagtatctgcagctgttaaggctttcatgactgctgatctacctcacgaattgattgag
cttcttgagaagattgtgcttcagaattctgcattcagtgggaactttaatctgcagaat
ctgcttattttaacggcaataaaggctgatccgtccagagttatggattatattaataga
ctagataattttgatgggcctgcagttggagaaatggctgttgaggctcagttatatgag
gaagcatttgcaattttcaagaagttcaacttaaatgtccaagcagtcaatgtcttgcta
gataatattcatagcattgatagagctgtggagtttgctttccgagttgaagaagatgct
gtttggagtcaggtggccaaggctcaactaagggaagggctagtaagtgatgccattgag
tcctttatacgagctgatgatgccacacaatttttagatgttatccgtgctgctgaagat
ggcaatgtttaccatgacttggtgagatacttgctgatggtaaggcagaagacaaaagaa
cccaaggtggacagtgagctcatttatgcatatgcaaagattgataggctaagtgacatt
gaggagttcattcttatgccaaatgtagccaatcttcaaaatgttggtgaccaattgtat
gatgaagaactatatgaggctgccaaaatcatatttgcctttatatctaactgggccaag
ttagcagttacacttgtgaagttgaaacagttccaaggtgcagttgatgcagcaaggaaa
gctaacagtgcaaaaacatggaaggaagtttgctttgcatgtgttgacgcagaggagttc
cgtttggcccagatatgtgggcttaacattattattcaggtggatgacttggaagaggtc
agtgaatattaccaaaatagaggttgcttcaatgagctaatatccctcatggagagtggt
ttaggattagaacgggcacatatgggtatctttacagagttaggagttctgtatgctaga
tatcgttatgagaagctcatggagcatatcaaactatttgcgacccgactcaatattcca
aaactcataagagcttgtgatgaacaacaacattggaaggagctgacctatttgtacatc
caatatgatgagtttgataatgctgcaacaaccatcatgaaccattcacctgaagcatgg
gatcacatgcaattcaaagatgttgttgtcaaagttgctaatgtagagttgtattacaag
gctgttcacttctatttacaagagcatccagatcttatcaatgatgttttgaatgtcctt
gcacttcgtgttgatcatgcacgtgttgttgacatcatgcgaaaggctggtcatctccgt
cttgtcaagccttacatggttgcagttcagagtaacaacgtgtctgctgttaatgaagcc
ctgaatgaaatatatgttgaggaggaagactatgatagattgcgcgagtcaattgatttg
catgataactttgaccaaataggccttgcacagaagattgaaaagcatgagcttcttgag
atgagacgtgtcgctgcttatatttacaagaaggcaggtagatggaaacagtccattgcc
ttgtcaaagaaagataacctttacaaagatgccatggagacagcctcacaatctggtgac
cgtgaacttgctgaggagttgcttgtttatttcattgatcagggaaagaaagaatgcttt
gcctcgtgtctatttgtttgctatgatttgatccgggcagacattgctcttgagttggcc
tggatgaacaatatgattgactttgccttcccatatctcctgcagtttatccgtgagtac
actggcaaagttgatgaactggtgaaggataaaatagaagcgcagaaccaagtgaaagct
aaagagcaagaagagaaggaagtaattgctcaacagaatatgtatgctcagttgttgcct
cttgctttgcctgcaccgccaatgcctggaatgggaggaggctttgcccctccccctcca
atgggtggattggggatgcctccaatgccaccttttggtatgccacccatgggtagttac
tga
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integrated database retrieval system