Glycine max (soybean): 100802342
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Entry
100802342 CDS
T01710
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmx04131
]
100802342
Membrane trafficking [BR:
gmx04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
100802342
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RIC1_2nd
RIC1
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_EML_2
Beta-prop_VPS8
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
100802342
NCBI-ProteinID:
XP_003534547
UniProt:
I1L6H1
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All DBs
Position
9:complement(47959220..47972316)
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AA seq
1121 aa
AA seq
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MYMAYGWPQVIPLEQGLSPSAQKIVYLKLINRTLLVVSPTHFELWSTSQHRVRLGKYKRD
SDSLQREGENLQAAWSPDAKLIAILTSAFFLHIFKVQLSDKRIHTGGKQPSALCLATVSL
LLTEQVPFAVKDLSVSNIVSDNKHMLLGLSDGTLYSMSWKGEFYGAFQFDPQPTSSFDNS
QMPLTLENGLSPKSHPKVLMSNHIIPRKSEINQLELCLPLRLLFVLYSDGQLVSCSVSKK
GLKQVDCIKAEKSLACGDAVCASVALEQQILAVGTKRGIVELYDLAESVSLIRAVSLYDW
GYSMDDTGPVSCIAWTPDNSAFAVGWKLRGLTVWSVSGCRLMSTIRQIGLSSVSSPISKP
NHDCKYEPLMGGTSLMQWDEYGYRLYAIEVGSSERIISFSFGKCCLSRGVSGTTYIRQVI
YGEDRLLIVQSEETDELKMLHLKLPVSYISQNWPVQHVAASQDGMYLAVAGLHGLILYDI
RLKRWRVFGDVTQEQKIQCKGLLWLGKIVVVCNYVDSSNTYELLFYPRYHLDQSSLLCRK
PLLAKPMVMDVYLDYMLLTYRPFDVHIFHVKLFGELTPSGNPDLQLSAVRELSIMTAKSH
PAAMRFIPDQFPRESISNISVSSDSLTREPARCLILRANGELSLLDLDDGRERNLTDSVE
LFWVTCGQSEDKTNLIEEVSWLDYGHRGMQVWYPSPGANSFKQEDFLQLDPELEFDREVY
PLGLLPNAGVVVGVSQRMSFPASAEFPCFEPSPQAQTILHCLLRHLLQRDKIEEALRLAE
LSAEKPHFSHCLEWLLFTVFEAEISRPNVNKNQISVVNHAKRSLLEKTCDLIRNFPEYLD
VVVSVARKTDGRHWADLFTAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVSQYCA
LRLLQATLDESLYELAGELVRFLLRSGREYDQASNDSDKLSPRFLGYFLFRSSEQKQSLD
KSTSFKEQSAHVTSVKNILENHASYLMSGKELSKLVAFVKGTQFDLVEYLQRERYGSARL
ENFASGLELISQKLQMGTLQSRLDADFLLSHMCSVKFKEWIVVLATLLRRSEVLFDLFRH
DVRLWKAYSTTLESHPAFTEYQDLLEDLEESLSSVANVEGK
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggcatatgggtggcctcaggtcatccctctggagcaaggactgtctccctct
gcacagaagattgtatacctcaaactcatcaatcgcacgttactcgttgtctcccccact
cactttgaactctggagcacttcccagcatagagtgagattggggaagtacaagagagat
tcagattcattgcagagggaaggagaaaacttgcaggccgcgtggagccctgatgccaaa
ttaatcgctattcttacatctgcattctttcttcacattttcaaggtccagctctcagat
aaaagaatacatactggtgggaaacaaccctctgctttgtgcctagctactgtttctctt
ctgcttacagaacaagttccttttgcagtaaaggatttgtcagtgagcaatattgttagt
gataacaaacatatgctacttggactttctgatggaactttatacagtatgtcttggaaa
ggggagttctatggtgcttttcaatttgatccacaacctacctctagctttgacaattct
caaatgccacttactctagagaatggcctttctcctaaaagtcacccaaaggttcttatg
tccaatcacattattcctagaaagtctgaaatcaaccaactggagctttgccttccgttg
aggttgctatttgtcttgtattctgacgggcaacttgtctcatgctctgtgagtaaaaaa
ggcctaaagcaagttgactgtatcaaagcagaaaagagtttggcttgtggtgatgctgtc
tgtgcttcagtagctctagagcagcaaattcttgctgttggtaccaaaagaggaatagtg
gagttgtatgatttggctgaatcagtatcacttatacgtgccgtctctttgtatgactgg
ggatattcgatggatgacactggccctgttagttgcattgcttggacacctgataattcc
gcttttgcagttgggtggaagttaagggggcttacagtttggtctgtttctgggtgtcgc
ttgatgtcaacaatccgacaaataggattaagttctgtgtcttctccaatatctaaacca
aaccatgattgtaagtatgaaccattgatgggtggtacctcactgatgcagtgggatgaa
tatggatatagactttatgctattgaggtggggtcttcagagagaattatatcgttctca
tttgggaaatgctgtcttagcagaggtgtttcaggcactacatacatccggcaagtgatt
tatggggaagaccgtttactgattgtgcagtcagaagagactgatgaacttaaaatgcta
catcttaagcttccagtttcttatatttcccaaaactggcctgttcaacatgtggcagct
agccaggatggaatgtacttagcagttgctggtcttcacggtttgatattgtatgatata
cgattgaaaagatggagagtatttggagatgttactcaggagcaaaagattcagtgtaaa
ggcttgttatggctggggaagattgtcgttgtctgcaactatgttgattcatcaaacact
tatgaattgctcttttacccaagatatcaccttgatcaaagctcattactctgtcgaaaa
ccgttgcttgctaaaccaatggtgatggatgtgtacctagattatatgctgcttacatat
agaccatttgatgtccacatattccatgtgaaattatttggtgaattaactccttcagga
aatccagatttacagctttctgcagtacgagaactttcaattatgactgccaagagccat
cctgcagcaatgcgattcattcctgatcaatttccaagagaatctatttcaaacatttcg
gtttcgtcagattcattaacaagagagccagcaagatgtttgatattgagagcaaatggg
gagctttcacttcttgacttggatgatggacgggagagaaaccttactgattcagttgaa
ctattttgggtcacctgtggccagtctgaggataaaacaaatttgattgaggaagtttca
tggttagattatggtcatcgaggcatgcaggtttggtatccatctccaggtgctaattct
tttaagcaggaggatttcttacagttggatccggagctggagtttgatcgtgaagtatac
cctttgggacttcttccaaatgctggtgtggttgttggtgtttcccagagaatgtcattt
ccagcaagtgctgaatttccatgttttgaaccatctcctcaagcacaaacaatactgcac
tgcctactccgccatcttcttcagagggacaaaattgaggaagccttaaggcttgcagag
ctatcagctgagaagccccatttttcacattgtctagagtggcttctttttacagtattt
gaagcagagatatccaggccaaatgtgaacaagaaccagatctcagttgttaatcatgct
aaaaggtctcttttagagaagacctgtgacctgatcaggaattttccggagtaccttgat
gttgttgtaagtgttgcaagaaaaactgatggtcgtcattgggcagatttgttcactgct
gctggaagatcaacagaattgtttgaggaatgctttcaacgtagatggtatcgcactgca
gcttgctatatacttgtgattgccaaacttgaaggtcctgctgtcagtcagtactgtgca
ttacgattactacaggcaacacttgatgaatcattgtacgagcttgctggggagctggtg
cggttcttgctaagatctggtagggaatatgaccaagcatcaaatgattcagataaattg
tctcccagatttttaggctattttctttttcgttctagtgagcagaagcaatcactggat
aaaagcacctcattcaaagaacaaagtgctcatgttacctctgttaagaatattttagaa
aaccatgctagttacctgatgtctgggaaagagctctccaagcttgttgcatttgtaaaa
ggaactcagtttgatttagtggagtatctacaacgtgaaagatatggaagtgctcggttg
gagaattttgcttctgggcttgaactaataagccaaaagcttcaaatgggaacattacag
agccgtttggatgctgactttctcctatctcatatgtgctctgttaagtttaaggaatgg
atagttgtcctggctactctcttaagacgttctgaggttctttttgacttattccgtcat
gatgttcgtctgtggaaagcatacagcaccaccctggagtcacacccagcatttacagaa
tatcaagatttgctggaagacctggaagagagcctttcatcagttgcaaatgtggaagga
aaatga
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