Glycine max (soybean): 100802446
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Entry
100802446 CDS
T01710
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
100802446
Spliceosome [BR:
gmx03041
]
Common components
Common spliceosomal components
General mRNP proteins
100802446
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100802446
NCBI-ProteinID:
XP_003526844
UniProt:
I1KBE2
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All DBs
Position
6:12104219..12111462
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AA seq
549 aa
AA seq
DB search
MDFDEYDYLEKTVEEQEDHDSSRKKKESERSYRKREEIDEGIEETKSKRSRGDEENGSKK
DKDREERDRERRRDRDRDGERSSRDRDRDRDREKEREKGRERREKDKEREKREKEKEKEK
ERERERREREREREERERSRRSRSRSERERERERDFDTRDSRRFRDKKEAAEPEADPERD
QRTVFAYQMPLKASERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI
ALSGQLLLGQPVMVKPSEAEKNLVQSNATSGAAGVVGPYGAVDRKLYVGNLHFNMTESQL
REIFEPFGPVEIVQLPLDLEMGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSV
TDHVGNQDTTAKSADFDDDEGGLSLNAQSRALLMQKLDRSGIAASIGLPIANGSSPAQQA
IMPIGNPGIVPAVAPAVPTQIMPIPVTEPVGNPSECLLLKNMFDPNTETEPDFDLDIKED
VEEECSKYGRVKHIYVDKRSAGFVYLQFETVEAASAAQRAMHTRWFAGRMISAIYMLPQM
YETKFKGDA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtacgattacttggagaaaacagtggaggagcaagaggaccacgac
agcagccggaagaagaaggagagcgagaggagctacaggaagcgcgaggagatcgacgag
ggaatcgaagagacgaagagcaagaggtccaggggcgacgaagagaacggctccaagaag
gataaggaccgcgaagaacgcgacagggagcgccgcagggacagggatagagatggtgag
agaagtagcagagacagggatagggatagggatagggagaaggagagagagaaagggagg
gaacggagggaaaaggataaagagagggagaagagggagaaggagaaagagaaggagaag
gagagggaaagagaaagaagggagagggaacgggaacgggaagagagagagaggtctcgg
aggagtaggagtcgttccgagagagaaagagaaagagaacgggatttcgacaccagagat
agcaggagatttagggacaaaaaagaggcagcggagcccgaggcagatccagaaagggat
cagagaactgtttttgcttaccagatgcccttaaaggcatcggagagggatgcttatgaa
ttcttctcaaaagctggcaaggtgagggatgtccgtctgatcatggataggaactcaaga
cgatctaaaggagttgggtatattgagttttatgatgcaatgtcagtgccaatggcaatt
gctctctctggccaacttcttctaggacaacctgtaatggtcaagccttctgaggctgaa
aagaaccttgtccaatctaatgctaccagtggagctgctggagtagtaggaccatatgga
gctgtggacaggaaactatatgtggggaaccttcactttaacatgacggagagtcaattg
agagagatttttgagccatttggtccggtagagattgtacaactacctcttgacttggag
atgggacattgcaagggctttgggtttgttcaatttgcccatcttgagcatgccaaggct
gcgcagagtttaaatggaaaattggaaattgctggcaggactataaaggtttcatctgta
acagatcatgttggaaaccaagatacaactgccaaatctgcagattttgatgatgatgaa
ggtggattgtctttaaatgcccaatcaagagcattgcttatgcagaagctggaccgctct
ggcattgctgcaagcattggtctgcccattgcgaatgggtcatctcctgctcaacaggct
attatgcctattggtaatccaggtatagtaccagcagttgcaccagctgtcccaacacaa
attatgcctatcccagtgactgaacctgttggaaaccccagtgagtgtttactgttgaag
aacatgtttgatccaaacactgagaccgaaccagattttgatctagacattaaagaggat
gtagaagaagagtgttccaaatatggacgagtgaagcatatttatgttgacaaaagaagt
gcaggttttgtgtatttgcagtttgaaacagtggaagcagcaagtgctgctcaacgtgca
atgcacacaaggtggtttgcaggcagaatgatatctgctatctatatgctacctcagatg
tatgaaaccaaatttaaaggtgacgcttga
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