Glycine max (soybean): 100802620
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Entry
100802620 CDS
T01710
Name
(RefSeq) nuclear poly(A) polymerase 4 isoform X2
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100802620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100802620
Enzymes [BR:
gmx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
100802620
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
100802620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
100802620
NCBI-ProteinID:
XP_003526506
UniProt:
I1K9H3
LinkDB
All DBs
Position
6:complement(6824734..6830904)
Genome browser
AA seq
732 aa
AA seq
DB search
MAVSDSPSGGSTPPHQEQQANSKYGFTKPLSLAGPTDADLQRNNDLDKFLLDSGLYESNE
ESAARKEVLHRLDQIVKSWVKQLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPGVDIDT
LCIGPSYVNREEDFFIILHNILAEMEEVSELQPVPDAHVPVMKFKFQGISIDLLYASISL
LVVPEDLDISHGSVLYDVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRG
VYSNVTGFLGGVNWAILVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENEL
GFPIWDPRRNPRDRFHTMPIITPAYPCMNSSYNVSASTLRVMVDQFCYGNKICDEIELNK
AQWSALFQPYIFFEAYKNYLQVDIIASDTDDLLAWRGWVESRLRMLTLKIERDTNGMLQC
HPYPHEYVDTSKPCAHSAFFMGLQRKEGVRGQEGQQFDIRGTVDEFRQEINMYMYWKPGM
DIFVSHVRRKQLPAFVFPDGYKRTRMPRHISHQAEITGDDATNCYSGPGLSERCIKRKNY
SEMVDKKPDKPDKRASISPQRLECVSPESCTGKSGGTAQMSIECIKGVRLAGSTTKDANS
NCKIKSSDALPGSGLRTEVADMQISEAGFVNTTHDMLKSRSVEVPNENEVVNGDKAQDLA
LDCLESAETESTNSLSNYEEGDIDMDQRLDKACNFITRAECSDYVPNASSQNLNCEMSVS
EVLYKLKMGLGG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttccgacagtcccagcggcggctccacgccacctcatcaggaacaacaagcc
aacagcaagtacggtttcaccaagcccctctctctcgcgggtcccaccgacgctgatctc
cagcgtaacaacgatttggacaagttcttgctcgattcgggtctctacgagagcaatgaa
gaatccgctgcgaggaaagaggttcttcaccgccttgatcagattgtgaaaagctgggtg
aagcagttgacgcgccaacgtggctacacagatcagatggtagaggatgcaaatgctgtc
atttttacttttggctcttaccgactaggggttcatggacctggagttgacatagacact
ttgtgcattggtccttcttatgtaaaccgagaggaagatttcttcatcattttgcataac
atcctggccgaaatggaagaagtttctgaacttcaaccagttcctgatgcacatgttcca
gtaatgaaattcaaattccagggaatatctatagatttgctgtatgcaagtatatcactt
ttggttgtgccagaagacctagatatctcgcatggttcagtgctgtatgatgttgatgaa
ccaactgttcgaagtcttaatggctgccgtgtggcagatcaaattcttaaacttgttcca
aatgttgagcacttccgaactacactgagatgtttaaagttttgggcaaaaaggcgtggt
gtttattcaaatgttactggattccttggtggtgtaaattgggctattttagttgctcga
atttgccagctctaccccaatgcaatccctagtatgttggtttctcgattcttcagggtc
tatacacagtggcggtggccaaaccctgtaatgctatgctctatagaagagaatgaactg
ggattccctatatgggatcctcgtagaaacccccgggacagatttcacactatgccaata
attactcctgcatacccttgcatgaattcaagctacaacgtttcggcaagtactcttcgt
gttatggtggaccaattctgctatggcaataagatttgtgatgaaattgagcttaataaa
gcccagtggagcgcactttttcagccttatattttttttgaggcatacaaaaactattta
caagtggacataattgcatcagacacggatgatttactagcatggaggggatgggtagaa
tctcggttgagaatgcttaccctgaagatagagcgagatacaaatgggatgctgcagtgc
catccttacccacatgagtatgtagacacatccaagccatgtgcacattctgcatttttc
atgggcttgcaaaggaaagagggagtaagaggtcaagaggggcagcaatttgatatacgt
ggaacagttgatgaattcagacaagaaataaatatgtacatgtactggaagccagggatg
gatatttttgtttctcatgttcgtcgaaagcaactccctgcatttgtttttcctgatggt
tacaaacgcactcgaatgccaaggcatataagccatcaagctgaaataacaggtgatgat
gccacaaactgctactctgggcctggattgtctgaaagatgcatcaagaggaaaaattac
tctgaaatggtggataagaagccagacaaaccagataagcgggcatctataagcccacaa
aggttagaatgtgtttctcctgaaagttgtactggtaaatcaggtggtacagctcaaatg
agtattgagtgtattaaaggggttaggttagctggttcaacaaccaaggatgctaacagc
aattgtaaaattaagtcatctgatgcactccctggaagtggactaagaactgaggtagct
gacatgcagattagtgaagcaggctttgttaacactacacatgatatgttgaaatcaagg
agtgttgaagttccaaatgagaatgaagttgtcaatggggacaaagctcaggatctggct
ttagattgcttggaaagtgcagaaactgaatctactaacagcctgtcaaactatgaagag
ggtgatattgatatggatcagcgactagacaaagcatgtaatttcatcacaagggctgaa
tgttcagattatgtaccaaatgccagctcccagaacctcaattgcgagatgtcagtctcg
gaagtgttgtataaattgaagatggggctaggaggatga
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