Glycine max (soybean): 100802751
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Entry
100802751 CDS
T01710
Name
(RefSeq) exosome complex component RRP45A
KO
K03678
exosome complex component RRP45
Organism
gmx
Glycine max (soybean)
Pathway
gmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100802751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100802751
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100802751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
100802751
NCBI-ProteinID:
XP_006590471
UniProt:
K7LMJ0
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Position
11:1042901..1046230
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AA seq
438 aa
AA seq
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MEQRLANTWRMPLNDKKFIETALLSDLRLDGRRPSDYRKLTVKLAKQDGSAEVHLGQTHV
MTFVTAQLVRPYRDRPNEGSLSIFTEFSPMADPSFDPGRPSDAAVELGRVVDRGLRESRA
IDTESLCVLSGKLVWAIRVDIHILDNAGNLVDAANIAALASLLTFRRPECSLAGEDGQDV
VVHPPEERDPIPLIIHHLPIAVTFGFFSNENLLVIDPTHHEECVMTGRMTATLNSNGDVC
AIQKPGGESVSHSVIMHCLKLAHVKATDITTKIRDAVEIHNNERALRKIKRHSSSVAVDV
CGEKQNQLDASHLDKLKLEEEEESPMECEASPSGQEQSKDGVSKNFTGGPSSWDPYSECV
NSDLLKASLASRGPSVPSKQKDSRRETKPKEPPLEIKTDSTPINKALTAGQNNKGKTLKD
AVKPKHKKKKIVSSNNEN
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcggttagcaaacacatggagaatgcctcttaacgacaagaaattcatagaa
actgctctcctttccgacctccgactcgacggccgtcgcccctccgactaccgcaagctc
accgtcaagctggccaagcaagacggctccgcggaggttcatttgggccaaacccacgtt
atgaccttcgtcaccgcccaactcgtccgcccctaccgagaccgccccaacgagggctcc
ctctccatcttcaccgagttctctcccatggccgacccctccttcgaccccggccgcccc
tccgacgccgccgtcgagctcggccgtgtcgtggaccgtggcctccgcgaaagccgtgcc
atcgacactgaatcgctctgcgtcctctccggcaaactcgtctgggccattcgcgtcgat
atccacatactcgacaatgccggaaatctcgtcgacgctgcaaatatcgccgcgttggct
tctctgttgactttccggcggccggaatgctcgttggccggagaagacgggcaggatgtg
gtggtgcatcctcccgaggagcgcgacccgattccgttgattattcatcatcttcccatt
gctgttacctttggatttttcagcaatgaaaatctcctcgtgatagatccgacgcaccat
gaagagtgtgtgatgacaggccgcatgactgccacgcttaattcaaacggcgacgtttgt
gcaattcaaaagcctgggggagagagtgtctctcatagcgttatcatgcactgcttgaaa
cttgctcatgttaaagctactgatattacaactaagattagggatgccgttgaaatacac
aacaatgaaagggctttacggaagattaaacgccattcttcgtctgttgctgtggatgta
tgtggggaaaaacaaaatcaattggatgctagtcatttggacaaattgaagctggaagaa
gaagaagaaagtcctatggaatgtgaagcctcaccatcaggacaagagcaaagtaaggat
ggagtctcaaagaatttcaccggtggtccctcgagttgggatccctactcagagtgtgtc
aattcagatcttctaaaagcttctctagcttcacgcggaccgtcagttcctagtaaacaa
aaggattcaagacgtgaaactaagcccaaggaaccaccactagaaattaagacagattct
acaccaattaacaaggctctaactgctgggcagaataacaaaggtaagactctcaaggat
gccgtcaagcccaaacacaagaagaagaaaatagtatcttccaataatgaaaattaa
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