Glycine max (soybean): 100803068
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Entry
100803068 CDS
T01710
Name
(RefSeq) LOW QUALITY PROTEIN: probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00040
Pentose and glucuronate interconversions
gmx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100803068
Enzymes [BR:
gmx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
100803068
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
100803068
NCBI-ProteinID:
XP_040867920
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Position
18:868180..870690
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AA seq
403 aa
AA seq
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MAFSFTFMFQFLLLAPSVIYASPVQDPELVIQEVQKSINGSRRNLGYLSCGTGNPIDDCW
RCDPNWERNRKRLASCAIGFGKHAIGGKDGKIYVVTDPSDNPVNPKPGTLRHGVIQQEPL
WIIFKHDMVIKLHKDLLVNSYKTIDGRGATIHIAGGGPCIRVQKKTNIIIHGIHIHDCKR
GXGGYVSDSPNHRSWSARSDGDGITIFGGSHVWVDHCSLSNCFDGLIDVVHGSTAITISN
NNMTHHNKVMLLGHSDSYKADKNMQVTIAFNHFGVGLGGRMPRCRFGYFHVVNNDYTNWQ
HYAIGGSSSPTIFSQGNRFRAPNDEDHKEVTKHFKSSKSEWRKWNWRSEGDLMLNGAFFT
ASGAGATARYDKASSMAARPPMLVVSMTAGAGALRCNKGNLCH
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcattttcattcacatttatgttccagttcttgcttcttgccccatctgtgatctat
gcttctccagttcaagaccctgaattagtgatccaggaagttcaaaagagcatcaatggc
tcaaggagaaacttggggtatctttcttgtggaacggggaaccccattgatgattgttgg
aggtgcgaccccaactgggaaaggaaccgaaagcgtctagctagttgtgcaattgggttt
ggtaagcatgccattggtggaaaagatgggaaaatatatgtggtgactgaccctagtgat
aaccctgtgaaccccaagccaggaacattgagacatggtgttattcaacaagagcctttg
tggatcattttcaagcatgacatggtgatcaagctacacaaggatctcttagttaattct
tacaaaaccattgatggaagaggagcaaccatccacattgctggaggagggccatgcatt
agagtgcaaaagaagaccaatatcataattcatggcatacacatccatgattgcaaaagg
ggtnggggtggatatgtgagtgactctcctaaccatcgtagctggagtgcaagatcagac
ggtgacgggatcacaatctttggtgggagccatgtttgggtggaccattgctccttgtca
aactgttttgatggcctcattgatgttgttcatggctcaacggccatcaccatttccaac
aataacatgacacaccataacaaggtcatgctcttgggccacagtgattcctataaagct
gacaagaacatgcaagtcaccattgccttcaaccattttggagtaggactagggggaaga
atgccgagatgcaggtttggatactttcatgtggtgaacaatgattacacaaattggcaa
cattatgcaataggtgggagttcatccccaactattttcagccaaggcaatagatttcgt
gctccaaatgatgaagaccacaaagaggtgaccaaacattttaaatcatcaaagagtgag
tggaggaaatggaattggaggtctgaaggagatctaatgctgaatggtgccttcttcaca
gcttccggggcgggggcaactgctaggtatgataaagcgtcaagcatggcagcacgacca
cctatgcttgtggtttccatgacagcaggggctggagcacttagatgcaacaagggcaat
ctatgccactag
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