Glycine max (soybean): 100803274
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Entry
100803274 CDS
T01710
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmx04131
]
100803274
Membrane trafficking [BR:
gmx04131
]
Protein recycling
Others
EARP complex
100803274
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
EXOC6_Sec15_N
Get2_like
TetR_C_30
Motif
Other DBs
NCBI-GeneID:
100803274
NCBI-ProteinID:
XP_006591098
UniProt:
I1LKX8
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Position
11:16537689..16556132
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AA seq
1124 aa
AA seq
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MQPNLFPFGSVLGNPFIFNGDGDLSEGGGGIESSRVFFLLPFFLLSQGGAMDLSKVGEKI
LSSVRSARSLGLLPPVSDRPEVPARAAAAAAVARALAGLPPHQRYSLSSSSEELSSIYGS
RPQGQVVEELEDEFYEEDFDPIRHVLEHVPVEENELTYFEKQAALRLAQLDRVAERLSRH
VMEHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKQALL
DMLPTLTELRRALDMPSTLESLVEEGNYWKAFQVLSEYLQILDSLSELSAIQEMSRGVEV
WLGRTLQKLDALLLGVCQEFKEDGYITVIDAYALIGDTAGLAEKIQSFFMQEVISETHSV
LKAIVHEDEEGLSQNSRLTYSDLCLRIPDSKFRQCLLRTLAVLFDLMCSYHEIMEFQLER
KDSAAQTSNKCNEEISCSPGETQEVDSDVRACNNSMSSSRDVIHGSSSREESATKSSLTE
TSGSPYSDFHDTIKEAGKEDSATSSIESPWYHLRKEATTFVSQTLQRGRRNLWHLTASRV
SVLLSSAAVCTASIHQFLKNYEDLGVFILTGEAFCGIEAVEFRQKLKVVCENYFIAFHRQ
NVHALKMVLEKETWLKLPPETVHMISFAGLIGDGAPLISLSSGKSTNVSAVHSIKSVNMV
HTGARKNGFSHWIKSGNPFQQKLPTSNEGRGYSQPNGSVCGEFDGSSTNNFHDDKTPRKN
DINQMNGANSVSEDENEDLLADFIDEDSQLPSRSSKPHHSRALSSHVNDEENTTQTGSSL
CLLKSMDKYARLMQKLEVVNVEFFKGVCQLFGFFFYFIYETFGQQNASSTGKGTSSSLNY
RLRTALSRVNQDCEEWIKSQSSSPTSLSSPFVHAELTPTHPPNTNYGHSSGTSLGLKERC
VAVDTISLVARILNRSKAHLQSMLLQSNSTILEDFYVHLVDAVPDLTEHVHRTTVRLLLH
INGYVERVANCKWEVKELGMEHNGYVDLMLGEFKHYKTRLAHGGIRKEVQDLLLDYGLEI
VAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLHHFVSLNVKPKLQMVETFIKAYYLPE
TEYVHWARAHPEYSKSQVVGLVNLVATMKGWKRKTRLDILEKIE
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgaatttgtttccctttggaagcgtgctggggaatcctttcattttcaatggc
gacggcgatttgagcgagggaggaggagggatcgagagctctagggttttcttcttgctc
ccgttcttcttgctctcccagggaggagcaatggatttgtccaaggtcggcgaaaaaatc
ttgagttccgttaggtccgccagatctcttggattgctccctcccgtttctgatcgcccc
gaggttccagctcgagctgctgctgcagcggctgtagctcgtgctcttgcagggttacct
cctcatcagagatacagtctttcatcaagttcagaagaactaagttcaatatatggaagc
agacctcaaggccaagtagtggaggagctggaggatgaattctatgaagaggactttgat
ccaattaggcatgttttagagcacgttccagttgaagagaacgagctaacatattttgaa
aaacaggctgcccttagattggcacaactagatagagtagccgagcgtttatctcgccat
gttatggagcatcatgaagtgatggtgaaggggatgaatttggtcagagaattggaaaaa
gacttaagaattgcaaatgtcatctgtatgaatggaagaagacacttgacatcatctatg
aatgaggtttcaagagatctgattgtgaattcttattctaaaaagaaacaagctcttctg
gacatgcttccaaccttgactgaacttcgacgtgcattggacatgccatcaacacttgaa
tcccttgtagaagaagggaattactggaaggcatttcaagtcctatctgagtatttgcaa
atcttagatagtttgtcagagctttcagcaatacaagaaatgagtcgtggtgtggaggtt
tggctgggaagaactttacagaagctggatgctcttttattgggagtatgccaagaattc
aaggaagatggctatataacagtaattgatgcatatgcattaataggggatactgccggt
cttgctgaaaagatacagagtttcttcatgcaagaagttatatcagaaacacactctgta
ttaaaggctattgtgcatgaggatgaggagggactttcgcaaaatagtaggcttacttac
agcgacttatgccttcgaatacctgattcaaagttcaggcaatgcttattacgaacattg
gctgttttgtttgaccttatgtgttcataccatgaaattatggaattccagctagaaaga
aaggactcagcagcacaaacttcaaataagtgcaatgaagagatttcctgtagtccaggt
gagactcaggaagttgattcagatgtaagagcctgcaataattctatgtccagttccaga
gatgtaatacatggctcatcttctagggaggaatctgcaacaaagagctcactgactgaa
accagtggttcaccatatagtgattttcatgatacaattaaggaggctggaaaggaggac
agtgcaacatcaagcattgagtccccttggtaccatcttcgcaaagaagctacaacattt
gtttcacagacccttcaaagaggacgcaggaatctgtggcatctcactgcaagtcgtgtg
tcagtattgctttcttctgctgcagtctgtactgctagcattcatcaattcttgaaaaat
tatgaagacctcggtgtctttattttgactggggaagccttttgtggaattgaagcagtt
gaatttaggcagaagttaaaggttgtttgtgaaaactatttcatagcttttcatcgacaa
aatgtgcatgcactaaaaatggttttggagaaagagacttggctaaaattacccccagaa
acagtacatatgatcagttttgcaggacttattggtgatggagcaccgttgatttcttta
tccagtggtaaatcaactaatgtcagtgcagtccattccattaaatcggtgaatatggtt
cacactggtgcaaggaagaatgggttttctcactggattaaaagtggaaaccctttccag
caaaaattaccaacctccaatgaaggtcgtggttactcgcaacctaatggatcagtttgt
ggtgaatttgacggaagttcaaccaataattttcatgacgataaaacacccagaaagaat
gatatcaatcaaatgaatggtgccaattctgtttcagaagatgaaaatgaggatcttctt
gctgactttattgatgaagatagtcaactaccaagtcgaagttctaaaccccatcattca
agagctctctcttcacatgttaatgacgaagagaatacaacacaaactggatcttctctc
tgtctattaaagtctatggataaatatgcaaggcttatgcagaaattggaagtggtaaat
gttgagttcttcaagggagtatgccaattgtttggattttttttctattttatatatgaa
acatttggtcagcaaaacgctagttcaactggaaaaggcacttctagctctcttaactat
cgcctgagaacagctttatccagagtaaaccaagattgtgaagagtggattaagtctcaa
tcatcgtcaccaacatctttgagttcaccatttgtacatgctgagttgacacctacacac
cctcccaatacaaattatggtcactcctcagggacttctttgggtctgaaggaaagatgt
gtggctgttgacactatatctcttgttgctcgaatactgaatagatctaaagctcatctc
caatcaatgctcttgcaaagtaattcaactatacttgaggatttctatgttcatctggtg
gatgctgtaccagatcttacagaacatgttcatcggactacagtgagactactgttgcac
attaatggatatgttgaacgtgttgccaattgtaaatgggaagtaaaagagcttggcatg
gagcataatggatatgttgatttgatgctgggggagtttaagcactataaaacacgactt
gctcatggaggaattcgtaaagaggttcaagacctattattggattatgggcttgaaatt
gtggcggaaactcttgttgaaggactttcacgggtgaagagatgtagtgatgaaggacgg
gcccttatgtcattagatctgcaggttttgatcaatgggttacaccattttgtgtcgctg
aatgtgaagcccaagctacaaatggttgagactttcatcaaggcttactaccttcccgag
acagaatatgtgcactgggcacgagcacacccggaatacagtaaaagccaggttgttgga
ctggtcaaccttgttgccactatgaaaggttggaagaggaaaaccaggttggacatacta
gaaaagattgaatga
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