Glycine max (soybean): 100803322
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Entry
100803322 CDS
T01710
Name
(RefSeq) oligouridylate-binding protein 1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100803322
03041 Spliceosome [BR:
gmx03041
]
100803322
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100803322
Spliceosome [BR:
gmx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100803322
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
xRRM
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
100803322
NCBI-ProteinID:
XP_003542369
UniProt:
I1LY79
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All DBs
Position
13:21575340..21579621
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AA seq
410 aa
AA seq
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MQPQRLRQHAMLQPSLYHHPALLTPPQIEPILSGNLPPGFDSSSCRSVYVGNIHPQVTDS
LLQELFSTAGALEGCKLIRKEKSSYGFVDYFDRSSAAFAIVTLNGRNIFGQPIKVNWAYA
SSQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFR
NQQDAQSAINDLTGKWLGSRQIRCNWATKGASASDEKQSSDSKIVVELINGSSEEGQETT
NDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSLNAGIIEDVRVQRDKGFGFVRYSTHA
EAALAIQMGNARILFGKPIKCSWGSKPTPLGTASTPLLPPSANVPGFSLAGLAAYERQMA
LSKMGGAHTLMHQQGQHALKHVDMGMGATGTGFDARFQNVATTQHLVYYQ
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccacagaggttaaggcagcatgccatgttgcaaccatctctctaccaccacccc
gctctccttactcctcctcagatagagcctatcttgagtggaaatctgccacctggcttt
gattcgagttcatgccgcagtgtttatgttggcaacattcatccccaggttacagattcc
cttcttcaagagcttttttcaactgcaggcgcccttgaaggatgtaaacttattaggaaa
gagaagtcatcctatggctttgtggactactttgatcgcagttctgctgcatttgccatt
gtaactctcaatgggaggaatatttttgggcagcctattaaggttaactgggcttatgct
agcagccagagagaggatacctcaggtcactttaatatttttgtcggtgaccttagtcct
gaggttacagatgcgacattgtatgcttgcttctctgtatatcctagttgttctgatgca
agggtaatgtgggatcagaagacaggccgttccaggggatttggatttgtttcttttcgg
aatcagcaggatgcccaaagtgctataaatgatttgactggaaaatggcttggaagtaga
cagattcgttgtaattgggcaaccaaaggggccagtgccagtgatgaaaagcagagttcg
gattcaaaaattgtcgtggagttgatcaatggatcatccgaagaaggccaggaaacaacc
aatgatgacactcccgagaagaatcctcaatataccactgtttatgttggcaatcttgct
ccggaggttacttctgttgatctccatcaacattttcattctcttaatgccggaattatt
gaagatgttagggtgcaacgagacaaaggttttgggtttgtgagatacagtacccatgct
gaagcagctcttgctatacagatgggtaatgcccgaattctatttggcaaacctatcaag
tgttcatggggtagcaagcctactcctctgggaactgcctctactcctcttctgccacct
tctgcaaatgtgccgggcttttctctggctggtcttgcagcatatgaacgtcaaatggct
ttgagtaaaatgggtggtgcacacacccttatgcatcaacaaggtcaacatgccctaaag
catgtagacatgggaatgggtgctactgggactggttttgatgcaaggttccagaatgtt
gcaaccacccaacacctagtgtactatcagtaa
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