Glycine max (soybean): 100804112
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Entry
100804112 CDS
T01710
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog isoform X2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmx01009
]
100804112
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100804112
Enzymes [BR:
gmx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
100804112
Protein phosphatases and associated proteins [BR:
gmx01009
]
HAD phosphatases
Fcp/Scp phosphatases
100804112
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
100804112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
100804112
NCBI-ProteinID:
XP_003519102
UniProt:
I1JGF0
LinkDB
All DBs
Position
2:38251719..38257047
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AA seq
706 aa
AA seq
DB search
MAKDKPVSVKDAVFKLQMSLLEGIQNEDQLFAAGSLMSRSDYEDIVTERSITNMCGYPLC
SNALPSDRPRKGRYRISLKEHKVYDLQETYMFCSSNCLVSSKTFAGSLQAERCSGLDLEK
LNNVLSLFENLNLEPVETLQKNGDLGLSDLKIQEKTERSSGEVSLEQWAGPSNAIEGYVP
KPRNRDSKGLRKNVKKGSKTGHGKSISDINLINSEMGFVSTIIMQDEYSVSKVPPGQMDA
TANHQIKPTATVKQPEKVDAEVVRKDDDSIQDLSSSFKSSLILSTSEKEEEVTKSCEAVL
KFSPGCAIQKKDVHSISISERQCDVEQNDSARKSVQVKGKTSRVIANDDASTSNLDPANV
EEKFQVEKAGGSLKTKPRSSLKSAGEKKFSRTVTWADEKINSTGSKDLCEFKEFGDIKKE
SDSVGNNIDVANDEDILRRASAEACAIALSSASEAVASGDSDVSDAVSEAGITILPPPHD
AAEEGTVEDADILQNDSVTLKWPRKTGISEADFFESDDSWFDAPPEGFSLTLSPFATMWN
TLFSWTTSSSLAYIYGRDESFHEEYLSVNGREYPCKVVLADGRSSEIKQTLASCLARALP
ALVAVLRLPIPVSIMEQGMACLLETMSFVDALPAFRTKQWQVVALLFIDALSVCRLPALI
SYMTDRRASFHRVLSGSQIRMEEYEVLKDLVVPLGRAPHISSQSGA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggacaagcctgtttctgtcaaagatgccgtcttcaaattgcaaatgtcactc
cttgaaggcattcaaaatgaagaccagctgtttgctgccgggtctttgatgtcaaggagt
gactacgaagacattgtaaccgaacgatccatcacaaacatgtgtggttatccactctgc
agcaatgctttgccatccgatcgcccgcggaagggtagatataggatttcactgaaggag
cacaaggtctatgacctacaagagacttacatgttttgttcttcaaattgtcttgttagc
agcaaaacttttgctgggagcttgcaagctgagagatgctctggtttagacctggagaaa
ctaaacaatgttcttagcttgtttgagaatttgaatctggaaccggtggagactttgcaa
aagaatggagatttaggtttgtctgatttgaaaatccaggagaaaacagaaagaagcagt
ggggaggtgtctttggagcagtgggctggaccttcaaatgcaattgagggatatgtacca
aaaccaagaaaccgtgattctaagggtttgcggaaaaatgttaaaaaagggtccaaaact
ggtcatggcaagtcaattagtgacataaatttaattaacagtgagatgggctttgtgagt
actataattatgcaagatgagtatagtgtttcaaaagtaccgccaggtcaaatggatgca
actgctaatcatcaaattaaaccaacagctacagtcaagcagccagaaaaggttgatgct
gaagtggtcaggaaagatgatgatagcattcaagatttgtcttcatcttttaagagcagt
ttaattttaagcacctcagaaaaagaggaggaagtaactaaatcatgtgaagctgtgctc
aaattctcccccggttgtgctattcaaaagaaagatgttcattcaatctccatatcagaa
agacaatgtgatgtggaacagaatgattctgctaggaaatctgtacaagtcaaagggaaa
acgagtagagttattgctaatgatgatgcttccacttccaatttagatcctgccaatgtt
gaagagaaattccaagtggaaaaagcaggtggatcattaaagactaaacccagatcttcc
cttaaatctgctggtgaaaagaaatttagtcgcactgttacttgggcggatgagaaaatc
aacagcactgggagtaaagatctttgtgagtttaaagaatttggagatattaaaaaagaa
tctgactcagtaggaaataatatagatgttgccaatgatgaagatatattacgtcgtgcg
tcagcagaagcttgtgctattgcattgagctcagcatcagaagcagttgcctctggagac
tcggatgtcagtgatgctgtttctgaagctggaatcactatattgccacctccacatgat
gctgctgaggaaggtactgtggaggatgctgatatactacaaaatgattcagttactctg
aaatggccaagaaagactggaatttctgaagctgatttctttgaatctgatgactcatgg
tttgatgctccaccagagggtttcagtttgactttgtcaccttttgcaactatgtggaat
accctcttttcatggacaacatcatcttctttggcatatatatatgggagggatgaaagt
tttcatgaagaatatctatcagttaatggcagagaatatccttgcaaagttgtcttggca
gatggtcgctcatctgaaataaaacaaactttagccagttgtcttgctcgagctttacct
gcgcttgttgctgtgctccggctgccaataccagtatctatcatggagcaagggatggca
tgcttgctggagacaatgtcatttgtggacgcacttccagctttcagaacaaaacaatgg
caagtggttgctcttttgttcattgatgcattgtccgtatgtagattacctgctcttatc
tcatacatgacggataggagggcttcatttcatagggttttgagtggttctcaaatacgt
atggaagagtatgaggttttgaaggatcttgtagtaccactgggccgagcacctcatatc
tcttcccaaagtggggcatga
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