Glycine max (soybean): 100804199
Help
Entry
100804199 CDS
T01710
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 isoform X1
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100804199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
100804199
Enzymes [BR:
gmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100804199
Spliceosome [BR:
gmx03041
]
Complex C
Other components
Step II factors
100804199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
AAA_24
SLFN-g3_helicase
Flavi_DEAD
AAA_30
TMEM247
nSTAND3
AAA_16
T2SSE
Sigma54_activ_2
ABC_tran
cobW
Motif
Other DBs
NCBI-GeneID:
100804199
NCBI-ProteinID:
XP_006595051
UniProt:
A0A0R0H501
LinkDB
All DBs
Position
13:42751052..42760832
Genome browser
AA seq
1271 aa
AA seq
DB search
MEKDGTGAGVIDIDKTTTTLEQEKPTSGGLYVPGKDRVVYVPQERKSRLGLDALASAKRS
QHDVGFKVPKERTISIAASAEDEDKSESSVSEESGHDGIVNRRRHTNRRYRDTTNETSHA
ESSVTEDHYGDTNRTPLTEHKGSDVPASPSRYDREDHRSERRHHRDDSRSGSGRVRQWDY
YESRGSYSERDSHSRYDREYGKKRNRYEGSRRTPAGRSDWDDGRWEWGDTPRRDSVSSSR
RHQPSPSPMFVGASPDARLVSPWLGGHTPHSSFTSSSPWDHVSPSPVPIRASGSSTKSSV
SKHNGRSHQLSFSSETSNRYEDEVADKSDLGEEHKYEITESMRLEMEYDADRAWYDREEG
STFDGDNSSLFLGDEASFQKKEAELAKRLVRRDGTKMSLAQSKKLSQLTADNAQWEDRQL
LRSGAVRGTEVQTEFDDEEEHKVILLVHDTKPPFLDGRVVFTKQAEPIMPLKDPTSDMAI
ISRKGSTLVREIHEKQSMNKSRQRFWELAGSKLGDILGVEKTAEQIDADTAEVGEDGEID
FKEEAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVREELLQVVRENQVVVVVGETGS
GKTTQLTQYLHEDGYTIGGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVT
GPKTIIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVAQRRDFK
LIVTSATLNAQKFSNFFGSVPIFHIPGRTFPVNILWSKTPVEDYVEGAVKQTMTIHITSP
PGDILIFMTGQDEIEAACYALAERMEQMVSSSKKAVPKLLILPIYSQLPADLQAKIFQKA
EDGARKCIVATNIAETSLTVDGIFYVIDSGYGKMKVYNPRMGMDALQVFPVSRAAADQRA
GRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKVENLLDFDFMDP
PPQDNILNSMYQLWVLGALNNVGGLTDLGWKMVEFPLDPPLAKMLLMGEQLGCLEEVLTI
VSMLSVPSVFFRPKDRAEESDAARERFFVPESDHLTLYNVYQQWKQHDYRGDWCNDHFLH
VKGLRKAREVRSQLLDILKTLKIPLTSCWPDTDIVRKAICSAYFHNSARLKGVGEYVNCR
NGMPCHLHPSSALYGMGCTPEYVVYHELILTTKEYMQCATAVEPQWLAELGPMFFSVKDS
DTSLLEHKKRQKQEKTAMEEEMENLKKVQAEVEKERKHKEKEKMAKHQQQISMPGLRKGS
STFLRPKKFGL
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggatggaactggtgctggtgtcattgacatagacaagaccacgacgacattg
gaacaggaaaaacctactagtggtgggctctatgttcctggcaaggatagagtggtttac
gtgcctcaggagagaaaatcgcgtttaggactcgatgcccttgccagcgcaaaacggtct
caacatgatgtgggcttcaaggtgccaaaagaaagaaccatttccattgcagcatctgca
gaggatgaagataagtccgagtcatctgtttctgaagaaagtgggcatgatgggattgtc
aacagacgcagacacactaataggagataccgtgatacgaccaacgaaacatctcatgca
gaaagttctgtgaccgaagatcactatggtgataccaaccgaactcctttaacagagcac
aagggttcagatgttcctgcatcgccttctagatatgacagggaggatcataggagtgag
aggaggcatcacagggatgattcaagaagcggtagtggaagagtgcggcagtgggactac
tatgagagtaggggatcttattcagaaagggattcacatagtaggtatgaccgtgagtat
ggcaaaaagcgaaacagatatgaaggttccaggagaacgcctgcaggcaggtctgactgg
gacgatggccgatgggaatggggagacactccacgaagggacagtgtctctagttctaga
cgtcatcaaccttcaccatccccaatgtttgtaggtgcctcacctgatgcacgattagtt
tcgccatggttgggaggccacactcctcattcatcctttacttcatcttctccttgggac
catgtttctccgtctcctgtcccaatacgtgcttctggatcttcgaccaaatcttctgtc
tctaaacataatggaaggtcacatcaacttagtttttcatctgaaacttcaaatagatat
gaggatgaagtggctgataagtctgacttgggtgaagaacacaagtatgagattaccgaa
agcatgcgtttagagatggaatatgatgctgaccgagcatggtatgatagagaggaaggt
agcacatttgatggcgataactcatcactttttcttggagacgaagcttcctttcagaaa
aaagaggctgagttggccaaaagactggtccgaagagatgggaccaagatgtcccttgct
cagagcaagaagttgtctcagctcacagctgataatgctcaatgggaggatcggcaactg
ctgagatcaggagctgttagaggtaccgaggttcagactgaatttgacgatgaggaagaa
cacaaagttattcttcttgttcatgatacaaagcctcctttccttgatggcagagttgtt
tttactaaacaggcagagccaattatgccattaaaagatccaacatctgacatggctata
atatctcgcaaaggatctactcttgttagagaaatccatgagaagcagagtatgaacaag
tctcgccaacgcttttgggaacttgcaggctcaaaacttggtgatatcttgggtgttgaa
aaaacagcagagcagattgatgcagacactgctgaagtgggtgaagatggtgaaattgat
tttaaggaggaagctaagttttcacagcatatgaagaagggagaagccgtgagtgacttt
gctaagtcaaaaacccttgcagagcaaaggcaatatctgcctattttttcagtgagagaa
gagttattacaggtggttcgtgaaaatcaggtggtggtggtggttggagaaaccggttca
ggaaagacaacacaattgacacagtatctgcatgaggatggctatactataggtggtata
gtaggctgcacccaaccaaggcgtgtggcagctatgagtgttgccaagagagttagtgaa
gagatggatacagagttgggtgataaagttggctatgctatacgttttgaggatgtgact
gggccaaagaccattataaagtacatgactgatggggtacttctacgtgaaacactcaaa
gactctgatctagacaagtatcgggttattgtcatggatgaagcccatgaaagatcttta
agcacagatgttctttttggaatattgaagaaagttgtagcccaacgtcgtgatttcaaa
ctgatcgtcacatcagcaactctgaatgcccagaaattttcaaatttctttggaagtgta
ccaatttttcatattcccgggcgaacatttcctgtgaatatattatggagtaaaactcca
gttgaagattatgttgaaggtgcagtgaagcagactatgactattcacataaccagtcct
cctggtgacatccttatcttcatgactggccaagatgagattgaggcagcttgctatgcc
cttgctgaaagaatggagcagatggtgtcatcttccaagaaagctgtccctaaactcttg
attcttcccatatactctcagcttcctgctgacttgcaagctaagatattccagaaagct
gaagatggagcccgtaaatgcattgtggccactaatattgccgagacatcattaactgtt
gatggtatcttctatgtcattgactctggctatggtaaaatgaaggtgtataaccctagg
atgggcatggatgctctccaagtcttccctgttagtcgtgctgctgctgaccagcgtgcc
ggtcgagctggtagaactggtcctggtacgtgctatcggttgtatactgagagtgcttac
ctaaatgaaatgttgcccagtcctgttccagagattcagaggactaaccttggcaatgtg
gttttgttgctgaaatctcttaaagttgaaaatttacttgattttgatttcatggatcca
cctccacaggataatattctcaattcgatgtaccagttgtgggtgttgggtgcccttaac
aatgtgggggggttaactgatcttgggtggaaaatggttgaatttccactggaccctccg
ctggccaagatgcttttgatgggtgaacagttagggtgtcttgaggaggttttgacaatt
gtttccatgctgtcagtgccatctgttttctttagacccaaggaccgggcggaagagagt
gacgctgcacgggaaagattttttgtgccagagtccgaccatttaaccttgtacaacgtt
tatcagcaatggaaacaacatgattacagaggtgattggtgcaatgatcattttttgcat
gttaaaggcctaagaaaggccagagaggttagatcccagctgcttgatattctcaagact
ttaaagatccccttaacctcatgttggccggatactgacattgtcaggaaagcaatttgt
tctgcatacttccacaattcagcaagattaaagggtgtgggggagtatgttaactgcagg
aacgggatgccatgtcatcttcatcccagtagtgctctctatggtatgggttgcactcct
gagtatgtagtttatcatgagttaatcctgaccacaaaggagtacatgcagtgtgcaaca
gcggtggagccccagtggctggctgagctgggacccatgtttttctctgttaaagattct
gatacatcattactggagcataagaagagacaaaaacaagagaaaacagccatggaggag
gagatggagaacttgaagaaggtgcaagcagaggttgagaaagaaaggaaacataaggag
aaggaaaagatggctaagcatcagcagcaaatctccatgccaggtttaaggaagggttct
tccacattcttgaggccaaagaagtttggtttgtaa
DBGET
integrated database retrieval system
