| Entry |
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| Name |
(RefSeq) DExH-box ATP-dependent RNA helicase DExH9
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| KO |
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| Organism |
gmx Glycine max (soybean)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:gmx00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100804792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:gmx03019]
100804792
03041 Spliceosome [BR:gmx03041]
100804792
03009 Ribosome biogenesis [BR:gmx03009]
100804792
03016 Transfer RNA biogenesis [BR:gmx03016]
100804792
Enzymes [BR:gmx01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100804792
Messenger RNA biogenesis [BR:gmx03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
100804792
Spliceosome [BR:gmx03041]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
100804792
Complex C
U4/U6.U5 tri-SnRNP related factors
100804792
Ribosome biogenesis [BR:gmx03009]
Eukaryotic type
Pre-60S particles
Helicases
100804792
Transfer RNA biogenesis [BR:gmx03016]
Eukaryotic type
tRNA degradation factors
TRAMP complex
100804792
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
8:complement(46718348..46731452)
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| AA seq |
981 aa
MGSLKRKSPEEPSSSTLQPLHDCVHHVSYPDGYNNVHASSSSPTHTTTSEPAKNFPFPLD
PFQSKSISCLENGESVMVSAHTSAGKTVVALYAIAMSLRNGQRVVYTSPIKALSNQKYRE
FKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSELTREVAWIVFDEVHYMRDRE
RGVVWEESIVLSPKNSRFVFLSATVPNAKEFADWVAKVHQQPCHVVYTDYRPTPLQHYLF
PSGGDGLYLVVDEKGKFREDSFQKSLNALIPATEGDKKKENGKWQKGLVLGRSGEESDIF
KMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKMDLNGDNEKDNIEQIFCSAMDMLSDDD
KKLPQVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKT
VVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDEKMEPSTAKNMVKGA
ADSLNSAFHLSYNMILNQMRCEDGDPENLLRNSFFQFQADRAIPDLEKQIKSLEEERESI
VIEEESSLKDYFNLLEQHRALNKEIRDIVLSPRHCLPFLQPGRLVSLECTSSDEDLPLIF
IEDQLTWGLVINFERVKSVSEDDASIKPEDASYIVDVLTRCVVRKDKIGKKSIKIVPLKE
VGEPLVVSVPISQINTISSLRLYIPKDLLPLEARENTLKKVLETLTRFGEKGLPLLDPEE
DMKIQSSSYKKASRRIEALESLFEKHEIAKSPLIKQKLKVFQRKQELTAKIKSIKKALRS
SSALAFKDELKARKRVLRRLGYATSDNVVELKGRVACEISSADELTLTELMFNGVLKDIK
VEEMVSLLSCFVWQEKIHDAAKPREELDFLFMQLQDTARRVAQLQLECKVEIDVESFVKS
FRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLIEAAKSIGETQLEA
KFEEAVSKIKRDIVFAASLYL |
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| NT seq |
2946 nt +upstreamnt +downstreamnt
atggggtcactaaagagaaagtccccagaggagccttcaagttcaactttgcaaccactc
catgattgtgtgcaccatgtctcatatccagatggttacaacaacgtccacgcttcttct
tcttctccaactcacactactacttcagaacccgccaagaacttccccttccctctcgac
ccttttcagtccaaatccatttcttgcctcgaaaacggcgagtccgtcatggtctctgca
cacacctctgctgggaaaaccgtggtggcattgtatgctattgccatgtccctccgtaat
ggccagcgcgtggtctacacttcccctatcaaggctctcagcaaccagaagtacagagaa
ttcaaggaagaattctccgacgttggtttgatgaccggagacgtcacaattgatcccaat
gcttcttgcttggtcatgactaccgaaatctggcgtagcatgcaatacaaaggctctgag
ctcactagggaggtagcttggattgtttttgatgaggtccattacatgcgtgatcgtgag
aggggtgtggtttgggaagagagcattgttttgtcccccaagaattcacgtttcgtcttc
ctctctgccactgtccccaatgccaaagagtttgctgattgggtggcgaaggtgcaccaa
cagccttgtcatgtcgtttatacagattaccgaccaactcccctccagcattatcttttc
ccttctggaggtgatggtctgtatttggttgtcgacgaaaagggaaagtttcgtgaagac
agttttcagaaatctttgaatgctctcattcctgccactgagggtgacaagaagaaagaa
aatggcaagtggcaaaaaggtttggtgcttggtagaagtggtgaagaaagtgacatattc
aagatggtgaaaatgatcattcagcgtcaatatgaccctgtcatactcttcagctttagc
aaaagggagtgtgagtttcttgcaatgcagatggcaaaaatggatcttaatggggataat
gagaaggataatattgaacaaatattttgtagtgctatggacatgctttcagatgatgat
aagaaacttccccaggtttcaaacatgctgcccttgctgaaacgtggaataggagtacat
cactctggtttactcccaattctaaaggaagtgattgagatcttatttcaagagggacta
atcaagtgtttgtttgccaccgagacatttagcattggtttgaacatgcctgcaaaaact
gttgttttcacaaatgtccggaagtttgacggggacaagtttaggtggatatccagtgga
gaatatattcaaatgagtggtcgtgctggtcgacgaggcattgatgaacgtggaatatgt
atcctcatggttgatgagaagatggagccttctactgctaaaaatatggttaaaggggca
gctgatagtctaaacagtgcctttcatttaagctacaacatgattttgaaccaaatgcgg
tgtgaagatggtgatcctgaaaatttgctacgtaattccttttttcagttccaagcagat
cgtgccattcctgatcttgagaaacaaataaagagtcttgaagaagagagggaatcaatt
gttattgaagaagaaagcagtctgaaggattatttcaatctgcttgagcagcatagagct
ttgaataaggagattcgtgacattgtgctgtctccaaggcattgtttaccttttttacag
cctggtaggcttgtctctctcgaatgcacatcaagtgatgaagatctacccctcattttt
attgaggatcagttgacttgggggttggtcattaattttgaaagggtcaagagtgtatct
gaagatgatgcaagcataaaacctgaagatgcatcttacattgttgatgttcttacgaga
tgtgttgtgaggaaagataaaattggaaaaaaatctatcaagattgttcctctgaaagaa
gttggagaacctctagtggtttcggttcctatctctcagatcaatacaataagtagtttg
cgtctatatataccgaaggatcttttgccattggaagctcgagaaaacacactgaaaaaa
gtgttggaaactcttactagatttggtgagaaaggattgccacttctagatcctgaagaa
gacatgaagattcaaagcagttcatataaaaaagcatctcgtagaatagaggctttggag
agcctatttgaaaagcatgaaattgcaaagtcaccacttataaaacagaaattgaaagtt
tttcagaggaagcaagaactgactgcaaagataaagtccattaagaaagcattaagatct
tcttctgctttagccttcaaggatgaacttaaggcaagaaagagagttcttcgtaggctc
ggatacgctacaagtgacaatgtagtggaattaaaagggagggttgcttgtgaaattagt
agtgcagatgaactgaccctaacagagctcatgttcaatggtgttttaaaggacataaag
gtggaggaaatggtttctctcctttcttgttttgtctggcaagaaaaaattcatgatgct
gccaaacctcgggaagaacttgattttctttttatgcaattacaagacacggctcggaga
gttgcccaacttcagctggagtgcaaggtggaaattgacgttgagagttttgttaagtcg
tttaggcctgacattatggaggctgtgtatgcttgggcgaaaggttcaaagttctatgag
atcatggaaatcactcaagtctttgaaggtagcttgattagagcaattagacgacttgag
gaagttcttcagcagttaatagaagcagctaagtcaattggggaaactcaacttgaggca
aagtttgaagaagctgtgtccaagatcaagagggacattgtctttgctgcatccctgtat
ttgtag |
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