Glycine max (soybean): 100804837
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Entry
100804837 CDS
T01710
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
gmx
Glycine max (soybean)
Pathway
gmx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100804837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100804837
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
100804837
mRNA cycle factors
Common to processing body (P body) and stress granule
100804837
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
100804837
NCBI-ProteinID:
XP_040865305
LinkDB
All DBs
Position
2:47994078..48000721
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AA seq
957 aa
AA seq
DB search
MDKVSSSRERAQRLYEKNLELENKRRRSAQAQVPSDPNAWQQIRENYEAIILEDHAFSEQ
HNIEYALWQLHYKRIEELRAYFNAAHASVSSKSSQGGKGPVRPDRITKIRLQFKTFLSEA
TGFYHDLIMKIRAKYGLPLGYFDDSQNNVVTEKDGKKSSEMKKGLISCHRCLIYLGDLAR
YKGLYGEGDSIKREFAAASSYYLQAASICPTSGNPHHQLALLASYSGDELAVIYCYFRSL
AVDSPFTTARDNLIVAFEKNRQSYSQLSGDVKALEVNGRGKGEAKLVNRDTGVDTCLRKG
GASNIQDTYKSFCTRLVRLNGILFTRTSLEILTEVLSLVSAGLRELLSSGQDEELNFGTD
TLENKLAIVRIVSIIIFTVHNVNKESEGQTYAEIVQRAVLLQNAFTAAFELMSLVVERCM
QLWDPSCSYLLPGILVFVEWLACYPYLAAGNDVDENQATVRSKFWNHCISFLNKLLSVWP
MSIEDDEEETCFNNMSRYEEGETENRLALWEDFELRGFGPLLPAQTILDFSRKNNLGSDS
EKERKARVKRILAAGKALANVVRIDQKMIYFDSKGKTFVIGVQPQISDDFVISSYSGMPN
AEDLLKDNTVVDKTKVGIGHPDHQQYIEGEEDDEVIVFKPIVAERRADVVVASSQAPHEG
LESVPKASIGDIKFNVNSTSNPLNDANHQISLPASVSPMMPQHLQPVQPHSSRWLEEEIS
LANSLKGLRFLENGHVMKPDLPFKAAVAISDHAALAVPTQQSVSASTNMFYAHDLSKAED
FAISSKIDAIASSGTFTDNSVVKTSSTLQAGLKKSLVSRPSRHLGPPPGFSHVPPKQGSP
TVSDSISGNPIMDDYSWLDGYQLPASTNDLGPDGPLTYSQSNPHQIGLSGTASFPFPGKQ
IPSTLQVEKQNGWRDFQTLELLKAHHNQQLQSQLAPNGNQHFTPLPEQFQGQSIWTG
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggataaagtgtcttcgtcacgggagcgtgcacaacgcctttatgagaagaatcttgaa
ttggagaataagcgaaggagatcagctcaggcgcaggtcccatcagatccaaatgcttgg
cagcagattcgggagaattatgaagcaataattcttgaggatcatgctttttctgagcag
cataatattgagtatgctctgtggcaattgcattataagcggattgaggaattgagggca
tactttaatgctgctcatgcttctgtaagctcaaaatcatctcagggagggaaaggtcct
gttcgacctgaccggataactaaaataaggctgcagtttaagactttcctttcagaagca
actggattttaccatgatcttattatgaaaatcagagcaaagtatgggcttccacttggt
tactttgacgactcacagaataatgttgtcacggagaaggatggaaaaaaatcttctgag
atgaagaaaggtttaatatcttgtcatcgttgtttgatatacttgggtgatcttgcacgc
tacaaaggcttatatggtgaaggtgactcaataaagcgtgagtttgcagcagcttctagt
tactatttacaagctgcatctatttgtcctacaagtggaaatccccatcatcagcttgct
ttgttggcttcatattctggggatgagctggcagttatttattgttattttcggagtttg
gctgtggatagtccatttacaactgccagggataatttgatagttgcatttgagaagaat
cgtcaaagttactctcagctttctggtgatgttaaagctcttgaagtcaatggaagagga
aaaggggaagcaaaacttgtgaacagggatactggtgtggatacctgtcttagaaaggga
ggagcatccaatatacaggacacttacaaatccttctgcacacgccttgtccgtctaaat
ggaatcttattcactcgtacaagccttgagatcctcaccgaagttctctctcttgttagc
gctggcctgcgtgagcttttatcatcagggcaagacgaagagctgaattttggcacagat
actcttgagaacaaacttgccattgtcagaattgtttccattatcatatttacagttcat
aatgtgaataaggaatctgaaggtcaaacatatgcagaaattgtacagcgtgctgttcta
cttcagaatgcattcactgcagcttttgaattgatgagtttagtagtagagagatgtatg
cagctgtgggatccttcttgtagttatctcttaccaggcattttggtttttgttgagtgg
ttggcatgttatccatatcttgctgcaggcaatgatgtggatgagaatcaggcaactgtc
agatcaaaattttggaatcattgtatatccttcttgaacaagctactttcagtttggccc
atgtctattgaagatgatgaagaggagacttgctttaataacatgagcaggtatgaagaa
ggggaaactgaaaaccggcttgctctgtgggaggattttgagttaagaggatttggtcca
cttctccctgcacaaaccatcttggatttttcaaggaagaataacctcggcagtgacagt
gaaaaggaaagaaaagctcgggtcaaaaggattttggctgccggaaaggctttagccaat
gttgttaggattgatcagaaaatgatatattttgactcaaagggaaagacatttgtaatt
ggtgttcagcctcaaatctcagatgattttgttatttcctcctattcaggtatgcctaat
gcagaagatttattgaaagacaacaccgtagtagacaagacaaaagtcggaatcggtcat
ccagaccaccaacagtacattgaaggagaggaggatgacgaggttattgttttcaaacct
atagtggctgagagacgagctgatgtggttgttgcctcatcacaggcaccccatgaaggt
ttagaatcagttccaaaagcttctattggggatataaaatttaatgttaattctacttct
aaccctctgaatgatgcaaatcatcaaatttctttacctgcttctgttagtcctatgatg
cctcaacacctacaaccagttcagccacattcttcgaggtggttagaggaggaaatatct
cttgctaacagtttgaaaggacttagattcttggagaatgggcacgtgatgaaacctgac
ttaccatttaaagctgctgtggcaatctctgaccatgctgcacttgcagttcctacccag
caatctgtaagtgctagtactaatatgttttatgctcatgatctctcaaaagctgaagac
tttgcaatatcatccaaaattgatgccattgcatcttctggaacattcactgataactct
gttgtgaaaacatcatccaccttgcaagctggtttgaaaaaatctctggtcagccgacct
tctaggcaccttggacctcctcctggtttcagtcatgttcctcctaaacaaggttcaccc
actgtttctgattcaattagtgggaatccaattatggatgattacagttggttggatgga
tatcagttgcctgcatcaaccaacgatttaggccctgatggtcctcttacttactctcag
tcaaatcctcatcaaattggtttgagtgggacagccagttttccctttcctggaaaacaa
attccatctacactgcaggtggagaaacagaatggttggcgagattttcagactttggag
cttttaaaagcacaccataatcagcagttgcagtcacagttggccccaaatggaaatcag
cattttactccactgcctgagcaatttcaaggacagtcaatctggacaggttaa
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