Glycine max (soybean): 100805072
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Entry
100805072 CDS
T01710
Name
(RefSeq) coatomer subunit alpha-2
KO
K05236
coatomer subunit alpha
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmx04131
]
100805072
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmx04147
]
100805072
Membrane trafficking [BR:
gmx04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100805072
Exosome [BR:
gmx04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100805072
Exosomal proteins of bladder cancer cells
100805072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Fis1_TPR_C
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
100805072
NCBI-ProteinID:
XP_003556297
UniProt:
I1NHR3
LinkDB
All DBs
Position
20:42941143..42946468
Genome browser
AA seq
1218 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDKFDEHDGPVRGVHFH
HSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCALFHPKEDLVVSASLDQTVRVWDISSLKRKSASPADDILR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSAADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDRFWILAAHP
EMNLLAAGHDSGMIVFKLERERPAFVVSGDSLFYTKDRFLCFYEFPTQRDAQVLPFRRPG
SLSLNQSPKTLSYSPTENAFLLCSDVDGGSYELYCISKQSYGRGDVQDEKRGHGASAVFV
ARNRFAVLEKSSNNVLIKNLKNDIVKKSVLPIATDAIFYAGTGNLLCRSEDKVFIFDLQQ
RIVLGELQTPFIKYVVWSDDMEHVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDENG
VFIYTTLNHIKYCLPNGDNGIIKTLDIPIYITKVSGNTIFCLDRDGKNRAIIIDSTEYIF
KLSLLKKRYDHVLNMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDEKIRFNLALESGNIQ
IAVASATAIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLVTGNMEKLSKM
LKIAEVKNDVMGQFHNALYMGDVRERVKILENVGHLPLAYITASVHGLHDVAERLAAELG
DNVPSLPAGKVPSLVMPPSPVMCGSDWPLLRVMRGMFDGVLDNTGRGVADEEEYEAADGD
WGEELDIVDADGLQNGDVTAILEDGEVAEENDEEGGWEMEDLGLGPEADTPKASISTQSS
VFVTPTPGMPVSHIWTQKSSLAADHAAAGNFDTAMRLLNRQLGITNFAPLKTMFLDLHTG
SHSYLRAFSSAPIISLAVERGWTESSSANVRGPPALPFKLSQLDEKLKAGYKFTTAGKFT
EALKTFVNILHTIPLIVVESRREVDDVKELIIIVKEYVLGSQMELKRREVKDNIVRQQEL
AAYFTHCNLQTPHLRLALQNAMTVCFRAKNLATAANFARRLLETNPTNENQARAARQVVA
AAEKNMTDATQLNYDFRNPFVICGATYMPIYRGQKDVSCPYCSSRFVPTQEGQLCNVCDL
AVIGADASGLLCSPSQIR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaaattcgagacgaagagtaacagagtgaagggactgagtttccatccgaag
cggccatggatcctggcgagtctccacagcggcgtcatccagctctgggactaccgcatg
ggaaccctcatcgacaagttcgacgagcacgacggccccgtccgcggcgtccatttccac
cactcgcagcccctcttcgtctccggaggtgacgattacaaaatcaaggtgtggaactac
aagctccaccgctgcctcttcacgctcctcggccacctcgactacatccgcaccgtgcag
ttccaccacgagaatccctggatcgtcagcgctagcgacgaccaaaccattcgaatctgg
aactggcaatcgcgcacttgcatctccgttttgaccggacacaatcactatgtcatgtgt
gcgttgttccatcctaaagaggatctcgttgtgtcagcttcgctcgaccagaccgttcgc
gtttgggacatcagctctctcaagcggaaatccgcgtccccggccgacgatatcctgcgc
ctcagtcagatgaacactgatctcttcggcggcgtggatgccgttgttaagtatgttttg
gaaggccatgaccgcggcgttaattgggcttccttccaccccacgctgcctctcattgtg
tccgctgccgatgaccgccaagtcaaactttggaggatgaatgacacaaaggcatgggaa
gtggacaccttgagagggcacatgaataatgtttcatgtgttatgttccatgccaaacag
gatatcattgtgtcaaattctgaagataaaagtattcgcatatgggatgcaacaaagaga
actggaattcaaacattccgccgagagcatgacaggttttggattcttgctgcccatcct
gaaatgaatctgctggcagctggtcatgacagtggcatgattgtttttaagctggagaga
gaaaggcctgcatttgttgttagtggtgattcgttgttctacactaaagaccggttcttg
tgtttctatgaattcccaacacaaagagatgcacaagtacttccgttccgacgaccgggc
tctttaagcttgaatcaaagcccaaagactctttcctatagcccaactgaaaatgctttt
cttctgtgttcagatgtagatggtggatcttatgagttgtattgcatatcaaagcaaagt
tatggtaggggtgatgtgcaagatgaaaaaagaggtcatggagcctccgcagtctttgtg
gctcgtaatcggtttgctgtgctggagaagagcagcaataatgtccttataaaaaatttg
aagaatgatattgttaaaaagagtgtccttccgattgccactgatgctatattctatgca
ggaacaggcaacttgctatgtaggtcagaggataaggtttttatatttgatcttcagcag
aggattgttcttggtgaacttcagaccccttttattaaatatgttgtctggtctgatgat
atggaacatgttgctttactcagcaaacatgccattataatagctagcaagaaacttgtg
caccaatgcactctccatgagactatccgtgtaaaaagtggagcttgggatgaaaatggt
gttttcatttatacaacactaaatcacatcaaatactgtcttcccaatggagataatggg
ataataaagacattggacattccaatttatatcacaaaggtctctggcaacacaatcttc
tgcttggatagggatggtaagaacagagcaataattattgattctactgaatatattttt
aagctttccctcttgaagaaaagatatgatcatgtcttaaacatgataaggaactcacag
ctttgtgggcaggctatgattgcttatcttcagcagaagggctttcctgaggttgcactg
cattttgtgaaagatgagaaaattcggttcaatttggctttagagagtgggaacattcaa
attgcagttgcatcagcaacagcaatcgatgagaaagatcactggtaccgattgggggtt
gaggctcttcgccaaggcaatgctggcattgtagagtatgcataccagagaacaaaaaat
tttgagagattgtctttcctttatcttgtcactggtaacatggagaaactgtccaagatg
ttgaaaattgctgaagtcaagaatgatgtgatgggccagtttcacaatgccctatatatg
ggtgatgttcgagaacgtgtgaagatattggaaaatgtgggccatttgcctcttgcttac
atcactgcatcagtccatgggctacatgatgttgcagaacggcttgcagctgaattggga
gataatgttccatctttgcctgcaggaaaagtgccttctctcgtgatgcctccatcacct
gtcatgtgtggaagtgattggcctcttctcagggtcatgcgaggcatgtttgatggggtg
cttgacaatacaggtcggggagttgctgatgaagaagagtatgaggctgctgatggtgat
tggggtgaggagcttgacatagttgatgcagatggcttacaaaatggagatgttactgcg
attttggaggatggagaagtggctgaagaaaatgatgaagagggtggatgggagatggag
gatttaggtctgggccctgaagctgacactcccaaagcttctatcagtacacaatcttca
gtttttgtgaccccaacacctggcatgccagtaagtcatatatggactcagaaatcatct
cttgcggctgatcatgcagctgctggaaattttgatactgcaatgaggttgctgaaccgg
caacttgggataacaaattttgcccccctgaaaaccatgtttctggatcttcatactggc
agtcattcctatctccgggcattttcttctgctccgatcatatcacttgcagttgaaaga
ggttggactgagtcatctagtgcaaatgtgagaggcccaccggcacttcctttcaaattg
tctcaattggatgaaaagcttaaagctggttataagtttactactgctgggaaattcact
gaggctcttaagacatttgttaatattcttcatacaattcctttgattgttgttgagtca
aggagggaagtggatgatgtgaaggaactaattatcatagtcaaagagtatgttttgggc
tcgcagatggagctgaagaggagggaagttaaggacaatatagtacgacagcaggagctt
gcagcatatttcactcactgcaaccttcagacacctcacttgaggctagctttgcagaat
gcaatgactgtctgcttcagggcgaagaaccttgccactgctgcaaactttgcccggagg
ctacttgagacaaatcctaccaatgaaaaccaagctagggcagcaaggcaagtggtagca
gctgctgaaaaaaacatgactgatgctacccagttgaactatgatttccggaacccattt
gtaatttgcggtgcaacctacatgccaatctatcgaggacagaaggatgtctcttgccca
tattgttcttcacgttttgtgcctacccaggagggacagctctgtaatgtttgcgatctt
gcagtgattggagcagatgcttctggtctgctttgttcaccttcccagatacgctga
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integrated database retrieval system
