Glycine max (soybean): 100805342 Help Entry 100805342         CDS       T01710                                  Name (RefSeq) vacuolar sorting protein 39   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism gmx  Glycine max (soybean) Pathway gmx04148   Efferocytosis Brite KEGG Orthology (KO) [BR:gmx00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     100805342  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:gmx04131]     100805342 Membrane trafficking [BR:gmx04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     100805342 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin zf-HC5HC2H AlaDh_PNT_N Motif Other DBs NCBI-GeneID:  100805342 NCBI-ProteinID:  XP_003517237 UniProt:  A0A0R0LJG6 LinkDB All DBs Position 1:52379888..52387045 Genome browser AA seq 1015 aa AA seqDB search MHCVLLSKSQAQASLKLCKKIRGCEEMVHSAYDCLELVRECPAKIESIESYGSKLLVGCS DGSLRIFAPETESSSDGSKSYALEKNLAGFAKKPVLSMTVVESRDFLISLSESIAFHRLP FFETIAVITKAKGANLFCWDHRRGFLCFARQKRVCIFRHDGGRGFVEVKDFGVADTVKSM CWCGENICLGIRREYVILNASNGALSEVFTSGRLAPPLVVSLPSGELLLGKENIGVFVDQ NGKLLPEGRICWSEAPLEVVIQKPYAIALLPRFVEIRSLRAPYPLIQTVVLRNVRHLCQS NDSTILALDNSIHGLFPVPLGAQIVQLTASGNFEEALSLCKLLPPEDSSLRAAKEGSIHI RYAHYLFDNGSYEEAMEHFLASQIEITYVLSLYPSIILPKTTIVHDPEKLDIYGDASYLS RASSGVSDDMEPPSTSHMSEFDESAALESKKMNHNMLMALIKYLQKKRFSFIEKATAEGT EEVVLDAVGDNFASYNRLKKTNKGRGNIPVSSGAREMASVLDTALLQALLLTGQSSVALE LLRGVNYCDLKICEEILRKGNHHVALLELFKHNSLHRDALELLHKLVDESKSGQSEITQR FKPEDIVEYLKPLCGTDPILVLEFSMLVLESCPSQTIDLFLSGNIPADMVSSYLKKHSPN MQARYLELMLAMNENAVSGNLQNEMVHIYLSEVLDWYADLSAQEKWDEKDHSPTRKKLLT ALESIAGYNPEALLKRLPLDALYEEHAILLGKMNQHDLALSLYVHKLNAPELALSYCDRV YESMHQPSSKNSSNIYLVLLQIYLNPRRTTAGFEKRITNLLSPQSKTIPKLTPTPSIKSR GRGSKKIAAIEGAEDTKVSLSSTDSGRSDGDADEYNDEGGSTIMLDEVLDLLSRRWDRIN GAQALKLLPKETKLQDLLSFLGPLLRKSSEMYRNCSVIKSLRQSENLQVKDKLYSQRKAV VKITGDSMCSLCHKKIGTSVFAVYPNGSTLVHFVCFRDSQNMKAVGKGSQLRKRL NT seq 3048 nt NT seq  +upstreamnt  +downstreamnt atgcattgtgtcctcctttccaaaagccaagctcaagcaagcttaaagttatgtaaaaaa ataagggggtgtgaggaaatggtgcacagcgcgtacgattgtctggaactggtgcgcgag tgcccagccaagatcgaatccatcgaatcctacggttcgaagcttctcgtgggctgctcc gatggatcgctccgaatattcgcgccggaaacggaatcttcctccgacggctccaagtcc tacgccttggagaagaacctcgccgggttcgcgaagaagcccgtgctctcaatgacggtg gtggagtcgcgagacttcctcatctcgctctctgaatccatcgcgttccacagactccct ttcttcgagaccatcgcggtcatcaccaaggccaagggcgctaacctcttttgctgggac caccgccgtggattcctctgcttcgccaggcagaagcgcgtttgcatcttccgacacgac ggtggcaggggatttgtggaggtgaaagattttggtgtggcggatacggtgaagtccatg tgttggtgcggtgagaatatatgtttagggattagaagagaatatgtgattctgaatgct tcaaatggagctttgtctgaggtttttacttctggaagactagcgcctcctctggttgtt tctcttccctccggagagcttcttcttggaaaggagaatattggggtttttgttgaccaa aatgggaagcttcttcctgaaggtaggatttgttggtcagaagctcctttggaagtggta attcagaagccgtatgctatagctttgttgcccagatttgtggagattcggtctctccga gctccttatcccctgatacaaacagttgttcttcgaaatgttcgccatctttgccagagc aatgattccacgatacttgctttggataattctattcatggcctctttcctgttcccctt ggagcccagatagtccaattaactgcttctggcaactttgaggaggccttgtcattgtgc aagcttcttccacctgaagattcaagtcttcgtgctgcaaaggagggttcaattcatata agatatgctcactatctttttgacaatgggagctatgaagaggctatggaacattttctg gcatctcaaatagaaataacctatgtgctttccctgtatccatccattatccttccaaag actactattgttcatgatccggagaagttggacatttatggggatgcttcatatctctcc agagcttcttcaggtgtgtcagatgatatggaacccccatcaacatctcatatgtcagaa tttgatgagagtgcagcacttgaatccaaaaaaatgaaccataatatgcttatggctctc ataaaatatttacagaagaagagatttagttttattgagaaggccaccgcagaaggaact gaagaagttgttttagatgcagttggggataactttgcatcttacaataggcttaagaaa acaaacaaggggcgtggtaatatacctgtcagttcaggagctcgggagatggcttcagta ttggatactgctctactccaagctttgcttctaactggacagtcttcagtggctttagaa ttactgagaggtgttaactactgtgatttgaaaatatgtgaggaaatacttcggaaaggc aatcatcatgttgctttattagaacttttcaagcacaactcattgcaccgggatgctctt gaacttcttcacaaattggtggatgagtcaaaatctggccagtctgaaattacacaaaga ttcaaacctgaggatattgtggagtatctcaagccactatgtgggacagaccccatactt gttctagagttctcaatgcttgttcttgaaagctgtccatctcaaactatagacctcttt ctgtctggaaatattccagcagatatggtgagctcatatttgaagaagcattctccaaac atgcaagctaggtacttggagcttatgcttgcaatgaatgagaatgcagtatctggcaat ttgcagaatgaaatggtgcacatctatctttctgaagtacttgattggtatgctgattta agtgctcaagaaaaatgggatgagaaagatcattccccaacaaggaaaaaattattgact gccttagagagtatagcaggatacaatccagaggctttgctaaaacgtcttccactagat gcattgtatgaagagcatgcaatattgttggggaaaatgaaccaacatgatctggcatta tctttgtatgttcataagcttaatgctccagaactggcattgtcttattgtgatcgggtc tatgagtctatgcatcagccatcttcaaaaaattccagcaacatataccttgtacttttg caaatttatttgaatcctcgaaggaccacagcaggtttcgaaaagagaattacaaatcta ttatccccacagagtaaaaccattccaaaacttactcctaccccatccataaaaagtaga ggccgagggtcaaagaaaattgctgcaatagagggtgcagaggacacaaaagttagttta agcagcactgacagtggcaggagtgatggtgatgcagatgagtataatgatgagggtggt tctactatcatgcttgatgaggtccttgatttgttgagccgcaggtgggatagaattaat ggagctcaggcccttaaacttttaccaaaagagacgaaattacaggatctactttcgttt cttggaccccttctgagaaaatctagtgaaatgtaccgaaattgttcggtgataaagagt ttgagacaaagtgagaaccttcaggtgaaagacaaactctacagtcagaggaaagcagtt gtgaagataaccggtgatagcatgtgttctctgtgccataagaaaatagggacaagtgtt tttgcagtctatccaaatggtagcacactcgtgcactttgtctgtttcagagattctcaa aatatgaaagcagtgggcaaagggtctcaattgaggaagcgactatga

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