Glycine max (soybean): 100805946
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Entry
100805946 CDS
T01710
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
gmx
Glycine max (soybean)
Pathway
gmx04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100805946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100805946
03009 Ribosome biogenesis [BR:
gmx03009
]
100805946
04131 Membrane trafficking [BR:
gmx04131
]
100805946
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmx04147
]
100805946
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100805946
Ribosome biogenesis [BR:
gmx03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
100805946
Membrane trafficking [BR:
gmx04131
]
SNARE
SNARE associated proteins
Others
100805946
Autophagy
Aggrephagy
Other aggrephagy associated proteins
100805946
Exosome [BR:
gmx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100805946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_22
AAA_14
AAA_33
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
ATPase_2
AAA_lid_PRS2_C
Parvo_NS1
AAA_18
IstB_IS21
ABC_tran
Viral_helicase1
AAA_7
NACHT
NB-ARC
AAA_24
TsaE
DUF815
Vps4_C
Sigma54_activat
Zeta_toxin
Sigma54_activ_2
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
100805946
NCBI-ProteinID:
XP_003538151
UniProt:
K7LQC6
LinkDB
All DBs
Position
11:16977788..16984692
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AA seq
806 aa
AA seq
DB search
MSHQAESSDSKSWKKDFSTAILERKKSPNRLVVDEAVNDDNSVVAMHPQTLEKLQLFRGD
TILIKGKKRKDTVCIALADDNCEESKIRMNKVVRSNLRVRLGDVVSVHACPDVKYGKRVH
ILPIDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRGVEFKVIETDPGEYCV
VAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRVHTKNMKLSDNVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDESIDAEVLNSMAVSNEHFHIALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSGGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDQESRYQI
FKACMKKSPVSKDVNLGALAEYTKGFSGADITEICQRACKYAIRENIEKDIEHERKRREN
PEAMDEDMEGEDVSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSDFNFP
AAVSRTAGSEPFATSAGGADEDDLYS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaccaagccgaatcctccgactcgaaatcttggaagaaggatttttccactgcg
attcttgaacggaagaaatcgccgaatcggttagtcgtggacgaagcggttaacgatgac
aattcggtggttgccatgcaccctcaaacgttggaaaaactccaactttttcggggagac
accatcctcatcaaggggaagaaacggaaggacacggtttgcatagctcttgcagacgat
aattgtgaagaatcgaagataagaatgaataaagttgttaggtcgaatttgagggttcgt
cttggagatgttgtttctgtgcatgcgtgccctgatgtcaagtatgggaagcgcgtccac
attcttcccattgatgataccatcgaaggtgtcactggcaatctctttgatgcttacttg
aaaccatatttcttggaggcttatcgtcctgtcagaaagggggatttatttcttgtccga
ggaggaatgagaggagtagagttcaaagtcattgaaactgatcctggggagtattgtgtg
gttgctccagacactgaaatattctgtgagggggaacctgtgaaaagagaggacgaagaa
aggctagatgaggttggctatgatgatgtgggcggtgtcaggaagcaaatggcacagatt
cgtgagttggtagagcttccactgagacacccacaactttttaaatcaattggtgtgaaa
ccacccaaaggaattttgctgtatggacccccaggctctggtaagacattgatagctaga
gctgttgctaatgaaactggagcattcttcttttgtattaatggcccagaaattatgtct
aaactggctggagagagtgaaagtaatctcaggaaggcatttgaagaagctgaaaagaat
gctccctccatcatctttattgatgagattgattctattgcacccaagcgggagaagaca
catggtgaagtcgaaaggagaattgtttcacagcttttgactcttatggatggattgaaa
tctcgtgctcatgttattgttattggagctacaaatcgaccaaatagcattgaccctgca
ttgagaaggtttggtagatttgatagggaaattgatattggtgttcctgatgaagttgga
agacttgaagtccttcgcgtacataccaaaaacatgaagctttcagataatgttgatcta
gagagaattgcaaaagatactcatggatatgttggtgctgaccttgctgccctttgcact
gaagctgctctacaatgcatcagggagaagatggatgtcattgatttggaagatgagagt
attgatgctgaagtactgaattctatggcagtttcaaatgagcatttccatattgctttg
ggaacaagcaatccatctgctttacgagaaactgttgttgaggtgcctaatgtcagctgg
gaggatattggaggccttgagaatgtcaagcgtgagctgcaagagactgttcaatatcct
gtggagcacccagaaaaatttgagaagtttggtatgtcaccgtcaaaaggggttctcttc
tatggtcctccaggatgtggaaaaactttgttggccaaagcaattgctaatgaatgtcaa
gctaacttcatcagtgtgaagggcccagaattgctcactatgtggtttggtgaaagtgaa
gccaatgttcgagaaatttttgacaaggccagacaatcagctccatgtgtcctcttcttt
gatgagcttgactccattgctactcagagaggaagtagtggtggagatgctggtggagct
gctgatagagttctgaatcaacttctgactgaaatggatggcatgaacgccaaaaagact
gtgttcataattggggccaccaacagacctgatatcattgactcagcacttcttcggcct
ggtcgtctagatcaactgatctacattcctcttcctgatcaggagtcccgttatcaaatc
ttcaaggcctgcatgaaaaagtcacctgtctcaaaagatgttaatttgggagcactagct
gagtatactaaaggctttagcggtgctgatataactgagatatgccaaagagcatgcaaa
tatgctattagagaaaacatagaaaaggacatagagcatgagaggaagagaagagaaaac
cccgaggctatggatgaagacatggagggggaagatgtttcagagatcaaggcggctcat
tttgaagagtcaatgaagtatgcgcgtaggagtgttagtgatgctgatatacgcaaatac
caagcatttgctcagactttacagcaatccaggggctttggaagtgactttaattttcct
gcagctgtgagtaggaccgcaggatctgaaccctttgcaacttctgctggtggagctgat
gaagatgatctctatagttag
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