Glycine max (soybean): 100805953
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Entry
100805953 CDS
T01710
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
gmx
Glycine max (soybean)
Pathway
gmx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100805953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100805953
03036 Chromosome and associated proteins [BR:
gmx03036
]
100805953
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100805953
Coactivators
SAGA/TFTC/STAGA complex
100805953
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100805953
STAGA complex
100805953
TFTC complex
100805953
SAGA complex
100805953
SLIK complex
100805953
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
DSE1_N
Beta-prop_VPS8
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_WDR75_1st
ASA1
Beta-prop_SCAP
Beta-prop_NOL10_N
CFAP251_N
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
PAC11
Beta-prop_SPT8
Beta-prop_Vps41
Tricorn_2nd
Ge1_WD40
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
Nbas_N
Beta-prop_DCAF12
Cytochrom_D1
WD_LRWD1
LisH_SSDP
LisH
PALB2_WD40
Dimer_MINDY4_N
Motif
Other DBs
NCBI-GeneID:
100805953
NCBI-ProteinID:
XP_003522395
UniProt:
I1JU70
LinkDB
All DBs
Position
4:5022163..5031927
Genome browser
AA seq
669 aa
AA seq
DB search
MEDDKIVGYVTAFLKKKGFTQTEKIFQEEFQHNKSNTSNSLLEPDIANHLLAFSQLETGP
ARFHDGYSRLRTWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHVQEARNFFNTFREDH
EMMHLRDLQKLEGVLSPNHLEEMEFAHSLRKSKFNIKICEYSYELLLQHLHSTQSTTILG
IINEHINFQVTPGQPSLISDDPEAVTLTGSSQEAANLINQKEIHWGLLEDSLEERLEKAG
ALLLDSEKGEGEAKEGENDETKKRSIEGGKQGGASVKKVKKDKGGSATGKSAKPEASTVP
AAPRVKPELPLPVIPTEVEQSVLEDLRNRVQLSSVALPSVSFYTFINTHNGLSCSSISHD
GSLIAGGFSDSSLKVWDMAKLGQQASSLSQGENDTSQNEQIFGQGGGKRQYTLFQGHSGP
VYAASFSPVGDFILSSSADSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASSSH
DRTARIWSMDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRVF
VGHRVMILSLAMSPDGRYMASGDEDGTIMMWDLSSGRCLTPLIGHTSCVWSLAFSSEGSI
IASGSADCTVKLWDVNASTKVSRAEEKSGSANSRLRSLKTLSTKSTPVYSLRFSRRNLLF
AAGALSKSG
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgacaaaatagttggatacgttacagcattccttaagaagaaaggcttcacg
caaaccgagaagattttccaagaagaattccaacacaacaaatccaacacttccaattca
cttctcgaacccgacattgccaaccacctcctcgccttctctcaattggagactggtcct
gctaggttccacgacggctacagcagactaagaacatggacttattcttcactcgatttg
tacaagcacgagttgctccgcgtactttatcctgtgtttatccactgctttatggatctt
gtcgccaaaggacacgttcaagaagctcggaacttcttcaatactttccgcgaagaccat
gaaatgatgcacttgcgtgaccttcagaagttggaaggagttctttctcctaaccatctt
gaggaaatggaattcgctcactcgcttagaaagagcaaattcaacataaagatatgtgag
tattcctatgagcttctgttgcaacatctacacagtacgcaatccaccactatacttggt
attatcaatgagcatattaactttcaagtaacccctggacaacctagcttaatttccgat
gacccggaagctgttaccctaactggaagcagccaggaagcagcaaacctgataaatcaa
aaagaaattcattgggggttgcttgaagactctcttgaagaacggctggagaaggccggg
gccttgcttttagactctgaaaagggtgaaggggaagcaaaagagggggagaatgatgag
actaagaaaagatccattgaaggaggaaagcaaggtggtgcttcagtcaaaaaagtaaaa
aaggacaagggtggaagtgcaactgggaaaagtgctaaaccagaagctagcactgtacct
gcagctcctcgagttaagccagaactccccttgcccgtaatcccaactgaagtggaacag
tccgtcctggaggatttaaggaaccgtgtacagcttagcagtgttgcattgccatcagtt
agcttttacacatttatcaatacacataatggtttaagctgttcatcaatatcccatgac
ggatcattgattgctggaggattttctgactcatcactgaaggtttgggatatggcaaag
cttggacaacaggccagttctctttcgcagggtgagaatgacacatcacaaaatgaacaa
atatttgggcaaggtggtgggaaaagacagtatacattgtttcaaggtcattcagggcct
gtttatgcagcctcttttagtcctgtcggggattttatcctttcatcctcagcagactca
acaattcgattatggagcacaaaacttaatgccaatcttgtttgttataagggtcacaat
taccctgtctgggatgttcagtttagtcctgtagggcattattttgccagctcgtcacat
gacagaactgctaggatttggtccatggacaggatacagcccttaagaataatggcaggg
cacttgtctgatgttgattgtgtgcaatggcatgccaactgcaactacattgcaactggt
tccagtgataaaacagttcgactatgggatgtgcagagtggtgagtgtgtccgggttttc
gttggtcacagggttatgattttgtctttggcaatgtctcctgatggtcgctatatggca
tctggcgatgaagatggcacgatcatgatgtgggacctctctagtggccgctgtctaaca
cctttgattggccacacatcatgtgtctggtcccttgctttcagttctgaaggttctatt
atagcatctggatctgctgattgcactgtaaaattgtgggatgtaaatgcgagcaccaag
gtttctagggctgaagaaaaaagtgggagtgctaacagcagacttagatcgctgaaaact
ttgtcaaccaaatctactccagtttactcattacggttttctcgaaggaatcttcttttt
gcggctggcgctctatcaaaaagtggttaa
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integrated database retrieval system
