Glycine max (soybean): 100805953
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Entry
100805953 CDS
T01710
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
gmx
Glycine max (soybean)
Pathway
gmx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100805953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100805953
03036 Chromosome and associated proteins [BR:
gmx03036
]
100805953
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100805953
Coactivators
SAGA/TFTC/STAGA complex
100805953
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100805953
STAGA complex
100805953
TFTC complex
100805953
SAGA complex
100805953
SLIK complex
100805953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_VPS8
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_Vps41
Tricorn_2nd
Ge1_WD40
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
Nbas_N
Beta-prop_DCAF12
Cytochrom_D1
WD_LRWD1
LisH
PALB2_WD40
Dimer_MINDY4_N
Motif
Other DBs
NCBI-GeneID:
100805953
NCBI-ProteinID:
XP_003522395
UniProt:
I1JU70
LinkDB
All DBs
Position
4:5022163..5031927
Genome browser
AA seq
669 aa
AA seq
DB search
MEDDKIVGYVTAFLKKKGFTQTEKIFQEEFQHNKSNTSNSLLEPDIANHLLAFSQLETGP
ARFHDGYSRLRTWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHVQEARNFFNTFREDH
EMMHLRDLQKLEGVLSPNHLEEMEFAHSLRKSKFNIKICEYSYELLLQHLHSTQSTTILG
IINEHINFQVTPGQPSLISDDPEAVTLTGSSQEAANLINQKEIHWGLLEDSLEERLEKAG
ALLLDSEKGEGEAKEGENDETKKRSIEGGKQGGASVKKVKKDKGGSATGKSAKPEASTVP
AAPRVKPELPLPVIPTEVEQSVLEDLRNRVQLSSVALPSVSFYTFINTHNGLSCSSISHD
GSLIAGGFSDSSLKVWDMAKLGQQASSLSQGENDTSQNEQIFGQGGGKRQYTLFQGHSGP
VYAASFSPVGDFILSSSADSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASSSH
DRTARIWSMDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRVF
VGHRVMILSLAMSPDGRYMASGDEDGTIMMWDLSSGRCLTPLIGHTSCVWSLAFSSEGSI
IASGSADCTVKLWDVNASTKVSRAEEKSGSANSRLRSLKTLSTKSTPVYSLRFSRRNLLF
AAGALSKSG
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgacaaaatagttggatacgttacagcattccttaagaagaaaggcttcacg
caaaccgagaagattttccaagaagaattccaacacaacaaatccaacacttccaattca
cttctcgaacccgacattgccaaccacctcctcgccttctctcaattggagactggtcct
gctaggttccacgacggctacagcagactaagaacatggacttattcttcactcgatttg
tacaagcacgagttgctccgcgtactttatcctgtgtttatccactgctttatggatctt
gtcgccaaaggacacgttcaagaagctcggaacttcttcaatactttccgcgaagaccat
gaaatgatgcacttgcgtgaccttcagaagttggaaggagttctttctcctaaccatctt
gaggaaatggaattcgctcactcgcttagaaagagcaaattcaacataaagatatgtgag
tattcctatgagcttctgttgcaacatctacacagtacgcaatccaccactatacttggt
attatcaatgagcatattaactttcaagtaacccctggacaacctagcttaatttccgat
gacccggaagctgttaccctaactggaagcagccaggaagcagcaaacctgataaatcaa
aaagaaattcattgggggttgcttgaagactctcttgaagaacggctggagaaggccggg
gccttgcttttagactctgaaaagggtgaaggggaagcaaaagagggggagaatgatgag
actaagaaaagatccattgaaggaggaaagcaaggtggtgcttcagtcaaaaaagtaaaa
aaggacaagggtggaagtgcaactgggaaaagtgctaaaccagaagctagcactgtacct
gcagctcctcgagttaagccagaactccccttgcccgtaatcccaactgaagtggaacag
tccgtcctggaggatttaaggaaccgtgtacagcttagcagtgttgcattgccatcagtt
agcttttacacatttatcaatacacataatggtttaagctgttcatcaatatcccatgac
ggatcattgattgctggaggattttctgactcatcactgaaggtttgggatatggcaaag
cttggacaacaggccagttctctttcgcagggtgagaatgacacatcacaaaatgaacaa
atatttgggcaaggtggtgggaaaagacagtatacattgtttcaaggtcattcagggcct
gtttatgcagcctcttttagtcctgtcggggattttatcctttcatcctcagcagactca
acaattcgattatggagcacaaaacttaatgccaatcttgtttgttataagggtcacaat
taccctgtctgggatgttcagtttagtcctgtagggcattattttgccagctcgtcacat
gacagaactgctaggatttggtccatggacaggatacagcccttaagaataatggcaggg
cacttgtctgatgttgattgtgtgcaatggcatgccaactgcaactacattgcaactggt
tccagtgataaaacagttcgactatgggatgtgcagagtggtgagtgtgtccgggttttc
gttggtcacagggttatgattttgtctttggcaatgtctcctgatggtcgctatatggca
tctggcgatgaagatggcacgatcatgatgtgggacctctctagtggccgctgtctaaca
cctttgattggccacacatcatgtgtctggtcccttgctttcagttctgaaggttctatt
atagcatctggatctgctgattgcactgtaaaattgtgggatgtaaatgcgagcaccaag
gtttctagggctgaagaaaaaagtgggagtgctaacagcagacttagatcgctgaaaact
ttgtcaaccaaatctactccagtttactcattacggttttctcgaaggaatcttcttttt
gcggctggcgctctatcaaaaagtggttaa
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